Query= MSMg01no047_d08.b1 MSMg01no047_d08.b1 CHROMAT_FILE:
MSMg01no047_d08.b1 PHD_FILE: MSMg01no047_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:31 2005
(379 letters)
>mm_chr5_39805819_39806597
Length = 779
Score = 613 bits (317), Expect = e-180
Identities = 356/375 (94%), Gaps = 10/375 (2%)
Strand = Plus / Plus
Query: 5 gaattcttggaggtcacgaaactgttccttattaatcttgctgtggtatcattgtgactc 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggagggcaagaaactgttccttattaatcttgctgtggtatcattgtgactc 264
Query: 65 atgaatattcatgctgattagaagaaaagttaaaacaaaattttaatttattctgttggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgaatattcatgctgattagaagaaaagttaaaacaaaattttaatttattctgttggt 324
Query: 125 cttcgtcaaacgaatagatacacgtacctatgtgagtgagtactttcctgggtatcttgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttcgtcaaacgaatagatacacgtacctatgtgagtgagtactttcctgggtatcttgc 384
Query: 185 tcttgttcctttaaggttagatatgtttatttctactcaattataccaaaaatccagttt 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 tcttgttcctttaaggttagatatgtttatttctactcaattatagcaaaaatccagttt 444
Query: 245 ggggctgattagtctgttccagtcatgtaaaatccagaccactttctgttttattttgtt 304
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 ggggctgattagtctgttccagtcatgtaaaatccagaccactttctgttttgttttgtt 504
Query: 305 ttgctttgctttgttttttgaaacaaatatttttactaaatcttcgagatttttgcagaa 364
||| |||||||||| ||||||||||| ||||||||||||||||||| ||||
Sbjct: 505 ttg----------ttttttgaaataaatatttttattaaatcttcgagatttttgtagaa 554
Query: 365 tattttttgatcata 379
||| ||||| |||||
Sbjct: 555 tatattttggtcata 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_d08.g1 MSMg01no047_d08.g1 CHROMAT_FILE:
MSMg01no047_d08.g1 PHD_FILE: MSMg01no047_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:31 2005
(359 letters)
>mm_chr5_39938165_39938924
Length = 760
Score = 638 bits (330), Expect = 0.0
Identities = 349/360 (96%), Gaps = 9/360 (2%)
Strand = Plus / Minus
Query: 1 caagccaaccggctacatattaagattctgcctcaataaaaatgataaatggcaatcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 caagccaaccggctacatattaagattctgcctcaataaaaatgataaatggcaatcact 608
Query: 61 aacacacacacacacacacacacacacacacacacacacacacacacacacacaccaaaa 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 a--------acacacacacacacacacacacacacacacacacacacacacacaccaaaa 556
Query: 121 caaacagaagatgaactattctgtggaaggaagaggacagtgagaggggaagatggtcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 caaacagaagatgaactattctgtggaaggaagaggacagtgagaggggaagatggtcaa 496
Query: 181 gacaggataatggggacacatgagggcagagctcaaggattcatggttttgagacgatca 240
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 495 gacaggataatggggacacatgtgagcagagctcaaggattcatggttttgagacgatca 436
Query: 241 taatgacattcactattctgtaggataataaaagttgcaataaaaataataaataatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 taatgacattcactattctgtaggataataaaagttgcaataaaaataataaataatgaa 376
Query: 301 atccagtctcagacatgtttatttactacagatgacaatgtt-aaaaaaaaaaaaaggca 359
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 375 atccagtctcagacatgtttatttactacagatgacaatgttaaaaaaaaaaaaaaggca 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 760
Length adjustment: 9
Effective length of query: 350
Effective length of database: 751
Effective search space: 262850
Effective search space used: 262850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
