Query= MSMg01no050_p14.b1 MSMg01no050_p14.b1 CHROMAT_FILE:
MSMg01no050_p14.b1 PHD_FILE: MSMg01no050_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:49:59 2005
(357 letters)
>mm_chr5_57985036_57985791
Length = 756
Score = 621 bits (321), Expect = 0.0
Identities = 348/357 (97%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 1 tttggttgcacacgtcttacatgattaaaatgacatagagagtattataaaaactctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggttgcacacgtcttacatgattaaaatgacatagagagtattataaaaactctag- 259
Query: 61 acctctggattcattttctcaccaggtataaactagtgcttgtttaatatgcatgcagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acctctggattcattttctcaccaggtataaactagtgcttgtttaatatgcatgcagct 319
Query: 121 gaggatacgctggtacatggttcttgcaagccagagatttacagaactaacatataaaat 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 320 gaggatacgctggtacatggttcttgcaagccagagatttacagaagtaacatataaaat 379
Query: 181 atggtaatataatgaatgtgttatcacctaccgtgcatgtgtactacaagattcatatca 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 380 atggtaatataatgaatgtgttatcacctactgtgcatgtgtactacaagattcatatca 439
Query: 241 gtttctttgactcacttcataactaatacaacacaattatgtcccaacttttttgccaga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 440 gtttctttgactcacttcataactaatacaacacaattatgtcccaacttttttgcaaga 499
Query: 301 tgcatgctttccctttccactccctgaattgaatctatttgtgaacaaaataatgaa 357
||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||
Sbjct: 500 tgcatgctttcactttccagtccatgaattgaatctatttgtgaagaaaataatgaa 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 756
Length adjustment: 9
Effective length of query: 348
Effective length of database: 747
Effective search space: 259956
Effective search space used: 259956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no050_p14.g1 MSMg01no050_p14.g1 CHROMAT_FILE:
MSMg01no050_p14.g1 PHD_FILE: MSMg01no050_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:49:59 2005
(139 letters)
>mm_chr5_58185002_58185539
Length = 538
Score = 242 bits (125), Expect = 8e-69
Identities = 134/137 (97%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 2 tctggattcaaaataaaatggtgtgtgtttgttctatttgaaaaggaattatttttaatt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tctggattcaaaataaaatggtgtgtgtttgttctatttgaaaaggaattatttttaatt 278
Query: 62 ctgatgacatctgacatatccatcaacaattacgttaatttttttttgttcattgtcttc 121
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 277 ctgatgacatctgacatatccatcaacaattacgttaatttatttt-gttcattgtcttc 219
Query: 122 ttgagagtagtacccct 138
||||||| |||||||||
Sbjct: 218 ttgagagaagtacccct 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 538
Length adjustment: 8
Effective length of query: 131
Effective length of database: 530
Effective search space: 69430
Effective search space used: 69430
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
