Query= MSMg01no055_f03.b1 MSMg01no055_f03.b1 CHROMAT_FILE:
MSMg01no055_f03.b1 PHD_FILE: MSMg01no055_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:42 2005
(241 letters)
>mm_chr5_137412273_137412913
Length = 641
Score = 466 bits (241), Expect = e-136
Identities = 241/241 (100%)
Strand = Plus / Minus
Query: 1 tgctcgggaaggtatttcaattaatcccttcccctagagccctgaagaccttttggtcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctcgggaaggtatttcaattaatcccttcccctagagccctgaagaccttttggtcag 382
Query: 61 aatcctaacctacagatagtatcagctcattcatttcaaactcccctattatctaagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcctaacctacagatagtatcagctcattcatttcaaactcccctattatctaagtca 322
Query: 121 tctggctggtcacaaggaacggacggccatggcagtgcacaagtgaggggtgtgctgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctggctggtcacaaggaacggacggccatggcagtgcacaagtgaggggtgtgctgaat 262
Query: 181 gtggttgtctgctgggagagagggctacaagagaaattggcaagaaaaaccatgcagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggttgtctgctgggagagagggctacaagagaaattggcaagaaaaaccatgcagagg 202
Query: 241 t 241
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no055_f03.g1 MSMg01no055_f03.g1 CHROMAT_FILE:
MSMg01no055_f03.g1 PHD_FILE: MSMg01no055_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:42 2005
(241 letters)
>mm_chr5_137305925_137306566
Length = 642
Score = 443 bits (229), Expect = e-129
Identities = 238/241 (98%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 1 ctttggctctgaatgctctgccattcaaaat-aaaaacaggctcatacacagaagagggg 59
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 201 ctttggctctgaatgctctgccattcaaaataaaaaacaggctcatacacagaacagggg 260
Query: 60 tgaggtgaaagggcagcctcgtttggattcaaatcaaccagctccatgctgaaatgcact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaggtgaaagggcagcctcgtttggattcaaatcaaccagctccatgctgaaatgcact 320
Query: 120 agcggagcccctctgccccaagcctgccttgccccttatggggaccctggggattgattt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcggagcccctctgccccaagcctgccttgccccttatggggaccctggggattgattt 380
Query: 180 ccatccatcctatttatttccagctggatacaaagaacggaaatggggtggggtggggtg 239
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 ccatccatcctatttatttccagctggatacaaagaacagaaatggggtggggtggggtg 440
Query: 240 g 240
|
Sbjct: 441 g 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
