Query= MSMg01no055_f20.b1 MSMg01no055_f20.b1 CHROMAT_FILE:
MSMg01no055_f20.b1 PHD_FILE: MSMg01no055_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:45 2005
(288 letters)
>mm_chr5_26563517_26564204
Length = 688
Score = 495 bits (256), Expect = e-144
Identities = 283/294 (96%), Gaps = 7/294 (2%)
Strand = Plus / Minus
Query: 1 ctattctattggctgttttttggtccaccactacccctgccaaaacaaaacacatcaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 623 ctattctattggctgttttttggtccaccactacccctgccaaaacaaaacaaatcaaaa 564
Query: 61 caaacaaa-aaaaaaccagaacaaatcatgaaacaagacaaa----aaacaaacaaacaa 115
|||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 563 caaacaaacaaaaaaacagaacaaatcatgaaacaagacaaaaaacaaacaaacaaacaa 504
Query: 116 acaaacaaaacatcagttgtgagttgtaagatcctgtatcttcacagtagaagg-gttat 174
|||||||||||||| |||||||||| |||||||||||||||||||||||| ||| |||||
Sbjct: 503 acaaacaaaacatcggttgtgagttataagatcctgtatcttcacagtag-aggtgttat 445
Query: 175 tactgtgttaagcattacagttccctagaatctgaactaaggtagacactgttgtgaagg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tactgtgttaagcattacagttccctagaatctgaactaaggtagacactgttgtgaagg 385
Query: 235 ataataaccagagagtacctaagagtgcaatgcctacaggaagaacaaaccagg 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataataaccagagagtacctaagagtgcaatgcctacaggaagaacaaaccagg 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no055_f20.g1 MSMg01no055_f20.g1 CHROMAT_FILE:
MSMg01no055_f20.g1 PHD_FILE: MSMg01no055_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:45 2005
(551 letters)
>mm_chr5_26469310_26470260
Length = 951
Score = 1050 bits (543), Expect = 0.0
Identities = 549/551 (99%)
Strand = Plus / Plus
Query: 1 tgctggagcagcccattgaattttggcaagagcatccacttggggtgagccctgtattag 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctggagcagcccattgcattttggcaagagcatccacttggggtgagccctgtattag 260
Query: 61 cattttaattgctgtctgattgctttcctgttgccagactcagcccacaaaggtacagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattttaattgctgtctgattgctttcctgttgccagactcagcccacaaaggtacagcc 320
Query: 121 agcaagtttcaattagttcttatcctgtgatttacggggtctataaagagcatctccctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcaagtttcaattagttcttatcctgtgatttacggggtctataaagagcatctccctg 380
Query: 181 tagcacttggaaagtaatacccttaatgtactaaaagcaatatagaacattaaagcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcacttggaaagtaatacccttaatgtactaaaagcaatatagaacattaaagcaaaa 440
Query: 241 gaatcggctgtacgaaggtgtgggtacccagcggtgctgggaaaggtcctatttgaacga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 gaatcggctgtacgaaggtgtgggtacccagcggtgctgggaaaggtcctatttgaagga 500
Query: 301 tggctttcttggttggcttctcactgaaataaaatgagacacaaaatccaaagatcctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggctttcttggttggcttctcactgaaataaaatgagacacaaaatccaaagatcctct 560
Query: 361 gaatcccacactaagcattgtctccttaatgtgaaggcattagtcaactcttcccctttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaatcccacactaagcattgtctccttaatgtgaaggcattagtcaactcttcccctttg 620
Query: 421 gtatgttttattttctgggacagctagttcatcagaatgacatgcacctgcggtgtggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtatgttttattttctgggacagctagttcatcagaatgacatgcacctgcggtgtggat 680
Query: 481 ttctttctttttattttttaatttttttattttttattacttattttcctcaattacatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctttctttttattttttaatttttttattttttattacttattttcctcaattacatt 740
Query: 541 tccaatgctat 551
|||||||||||
Sbjct: 741 tccaatgctat 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
