Query= MSMg01no057_e13.b1 MSMg01no057_e13.b1 CHROMAT_FILE:
MSMg01no057_e13.b1 PHD_FILE: MSMg01no057_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:11 2005
(341 letters)
>mm_chr5_103347821_103348566
Length = 746
Score = 615 bits (318), Expect = e-180
Identities = 340/352 (96%), Gaps = 11/352 (3%)
Strand = Plus / Plus
Query: 1 gttatttcttacttatttatt----catttattttgaattttgaaataaccttttaaact 56
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 195 gttatttcttacttatttatttattcatttattttgaattttgaaataaccttttaaact 254
Query: 57 tgtgcaaaaaaaaa--gccaaatatacaacaaaacaagaacaacagcagcaacaacaaac 114
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgtgcaaaaaaaaaaagccaaatatacaacaaaacaagaacaacagcagcaacaacaaac 314
Query: 115 cccagtgactttttttaactgacagtctaatca----gcctggggaaacacagacacttt 170
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 315 cccagtgactttttttaactgacagtctaatcaaccagcctggggaaacacagacacttt 374
Query: 171 accaaccccaaaacaatggaggaaaatggaacgcctttcattcatttaggctgcctttca 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 accaaccccaaaacaatggaggaaaatggaacgcctttcattcatttaggctgcctttca 434
Query: 231 cttttttcaacagcaattgttttcaaagtgcaaagtttacacttcatttattgaggttat 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cttttttcaacagcaattgttttcaaagtgcaaagtttacacttcatttattgaggttat 494
Query: 291 tgctacattttttttt-accttggttttcatcgtttacaatgacttgttttc 341
||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 495 tgctagattttttttttaccttggttttcatcgtttacaatgacttgttttc 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 746
Length adjustment: 9
Effective length of query: 332
Effective length of database: 737
Effective search space: 244684
Effective search space used: 244684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_e13.g1 MSMg01no057_e13.g1 CHROMAT_FILE:
MSMg01no057_e13.g1 PHD_FILE: MSMg01no057_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:11 2005
(337 letters)
>mm_chr5_103464344_103465080
Length = 737
Score = 576 bits (298), Expect = e-169
Identities = 333/360 (92%), Gaps = 25/360 (6%)
Strand = Plus / Minus
Query: 1 tgagtcaagagtctccatgagctacaaacaggtcggccattgcctggcagtaggaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tgagtcaagagtctccatgagctacaaacaggtcggccattgcctggcagtaggaacttg 588
Query: 61 gatatatatatatttcccacaacaacaac-----------------------aaaaaaaa 97
| |||||||||||||||||||||||||| ||||||||
Sbjct: 587 g--atatatatatttcccacaacaacaacaacaaaaaaaaaaaaaaaaaaaaaaaaaaaa 530
Query: 98 aaaccaatgggttaaagcatttatttcaaaaatattgaaagagataaaaaagaaataagc 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aaaccaatgggttaaagcatttatttcaaaaatattgaaagagataaaaaagaaataagc 470
Query: 158 atttatagcatttttatttgtctatttttatggctcatgtataaggcaacctcttggtag 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 atttatagcatttttatttgtctatttttatggctcatgtataaggcaacctcttggtag 410
Query: 218 tacaaaatgttttaagggaatgccagcagctttgttgcccttcagagatgtctgccaacc 277
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 409 tacaaaatgttttaagggaatgccagcagcattgttgcccttcagagatgtctgccaacc 350
Query: 278 atccccagtaccctgagatacatggcctgataggatacagggaaaatcagaggatatacc 337
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 349 atccccagtaccctgagatacatggcctgataggacacagggaaaatcagaggatatacc 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
