This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-058H11
Chromosome
5 (Build37)
Map Location
62,866,129 - 62,866,300
singlet/doublet
singlet
Overlap gene
none
Upstream gene
LOC100041524
,
G6pd2
,
LOC100041543
Downstream gene
Centd1
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC100041524
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100041524
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST
name
G6pd2
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:14380
MGI:105977
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100041543
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100041543
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins
pseudo
: _no_value
name
Centd1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:212285
MGI:2684416
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 75 ESTs, 11 Proteins
name
LOC100041524
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149253898
GeneID:100041524
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST
product
: hypothetical protein LOC100041524
transcript_id
: XM_001476530.1
name
G6pd2
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:13937388
GeneID:14380
MGI:105977
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: glucose-6-phosphate dehydrogenase 2
transcript_id
: NM_019468.1
name
Centd1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:94374749
GeneID:212285
MGI:2684416
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 75 ESTs, 11 Proteins
product
: centaurin, delta 1, transcript variant 1
transcript_id
: XM_132099.9
name
LOC100041524
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149253899
GeneID:100041524
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001476580.1
name
G6pd2
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:13937389
CCDS:CCDS19297.1
GeneID:14380
MGI:105977
definition
GO_function
: GO:0004345 - glucose-6-phosphate 1-dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO_process
: GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006006 - glucose metabolism [Evidence IEA]
codon_start
: 1
exception
: mismatches in translation
function
: pentose phosphate pathway
note
: glucose-6-phosphate dehydrogenase X-linked, pseudogene 1
product
: glucose-6-phosphate dehydrogenase 2
protein_id
: NP_062341.1
name
Centd1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:82897442
GeneID:212285
MGI:2684416
definition
codon_start
: 1
product
: centaurin, delta 1 isoform 1
protein_id
: XP_132099.8
name
LOC100041543
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100041543
definition
number
: 1
pseudo
: _no_value
name
LOC100041543
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100041543
definition
number
: 2
pseudo
: _no_value
clone name
MSMg01-481P18
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-067M05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-425I08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-340C21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-540G17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-320N13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-431O19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-340F22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-328L20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-090I13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-501I12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-090K19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-540J08
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-389K14
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-408I10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-094A21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-501D04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-266P11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-150C21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-086J02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-202P16
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-199C05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-260J23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-356B10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-501N19
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-113G08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-177B23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-438O12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-103I18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-302G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-116K10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336L02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-330G05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-174E18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-100H02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-065F11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-276N03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-209M13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-500F04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-063N22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-058H11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-148D07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-294L06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-057I22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-354K24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-400C01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-330J01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-075N14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-079J02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-473K11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-130K14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-466J18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-379A16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-337D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-235B23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-184H21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-105N08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-332D08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181K20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-545O24
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-354P23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-312F15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-189K13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-518O07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-363G13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-368P05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-363G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-538E19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-539B21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-338J02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-415H17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-264N03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-306M23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-076B02
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-079K03
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-403N07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-166F12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-166G12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-336C04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336C04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-492C23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-046D11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-237I12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-489C04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-130F12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-545D22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-139N09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-157M11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-541M04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-096K13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-150P20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-448C23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-465J12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-514N06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-263K10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-398K03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-381M16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-146C11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-134F20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-365P19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-514P04
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-457L24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-363I09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-485O04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-045H10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-361L07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-261B22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-365F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-476D08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-350D14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-204A20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-130H07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-125O23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-105B01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-330M21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-079A13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-342L10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-308H01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-141C24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-129P06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-111K03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-013N05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-262L09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-241P22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-070B21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-038F07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-278C22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-063K10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-107I22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-165J02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-157J02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-058G03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-272A12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-046A11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-179I03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-272F11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-276O21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-150N03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-334L20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-016A16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-130B22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-072G08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-185I24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-094M06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-094O04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-296I16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-116F21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-250G04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-135O17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-259P12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-109F03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-257M08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-193E24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-252M04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-262H19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157J20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-100N02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-034E21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-061M24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-180E05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-282I24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-289G10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-084H24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-203K04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-029P14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-083C06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-180B08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-268H09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-311B02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-328O02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-040B06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-210N17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-058K01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-294O14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-150E21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-163H22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-001E24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-216I17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-216F01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-262D22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-317K17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-040P20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-290K07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-092G02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-111C01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-211D01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-198A01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-197I06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-309C19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-218F11
singlet/doublet
singlet
plural/unique
unique