Query= MSMg01no058_p23.b1 MSMg01no058_p23.b1 CHROMAT_FILE:
MSMg01no058_p23.b1 PHD_FILE: MSMg01no058_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:23 2005
(281 letters)
>mm_chr5_93659278_93659958
Length = 681
Score = 478 bits (247), Expect = e-139
Identities = 271/283 (95%), Gaps = 8/283 (2%)
Strand = Plus / Minus
Query: 1 aagtctttttaaatggagaggcatatacctacacttgatcttaacccaaagctgagaggt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 302 aagtctttttaaatggagaggcatatacctacacttgatcttaactcaaagctgagaggt 243
Query: 61 ggtgggacacttatttatgacatgaaaaggcacactatactgcaacagttctctacttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggtgggacacttatttatgacatgaaaaggcacactatactgcaacagttctctacttga 183
Query: 121 cagttgtaaccccttacggggttggatggccttttcatggaggtcacctaagatcatccg 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cagttgtaaccccttagggggttggatggccttttcatggaggtcacctaagatcatccg 123
Query: 181 aaaacacagatatttacattattattcataacagtatcaagattacagttatgaaataac 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaaacacagatatttacgttattattcataacagtatcaagattacagttatgaaataac 63
Query: 241 atc----tttttaattttacagtgggggtcaccacaacatgaa 279
| | ||||||||||||||||||||||||||||||||
Sbjct: 62 aacaaaa----taattttacagtgggggtcaccacaacatgaa 24
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no058_p23.g1 MSMg01no058_p23.g1 CHROMAT_FILE:
MSMg01no058_p23.g1 PHD_FILE: MSMg01no058_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:23 2005
(166 letters)
>mm_chr5_93520902_93521467
Length = 566
Score = 321 bits (166), Expect = 1e-92
Identities = 166/166 (100%)
Strand = Plus / Plus
Query: 1 gatcagctactggtgaaccagtgctagtcacttaccctcagccaaagactggacagagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatcagctactggtgaaccagtgctagtcacttaccctcagccaaagactggacagagag 260
Query: 61 catctgaatcccgtagccaaaagtgggttcccagaaacttggatgtttgaagtctcaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catctgaatcccgtagccaaaagtgggttcccagaaacttggatgtttgaagtctcaggt 320
Query: 121 atgactctcagatgcccgccctagttctccccccacgcccctgccc 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgactctcagatgcccgccctagttctccccccacgcccctgccc 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
