Query= MSMg01no061_f16.b1 MSMg01no061_f16.b1 CHROMAT_FILE:
MSMg01no061_f16.b1 PHD_FILE: MSMg01no061_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:18 2005
(415 letters)
>mm_chr5_71487454_71488268
Length = 815
Score = 779 bits (403), Expect = 0.0
Identities = 412/415 (99%)
Strand = Plus / Minus
Query: 1 ggtttggaattacaagtccctgccaagaaaaagccctaaaggggggaaaacctcaaactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ggtttggaattacaagtccctgccaagaaaaagccctaaaggggggaaaacctcaaactg 556
Query: 61 ctccatctcgttcctgtctgcaatggaaagaaggcagcaggttcctttgctcagggctaa 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 555 ctccatctcgttcctgtctgcaatggaaagaaggcagcaggttccttagctcagggctaa 496
Query: 121 cataaactttttatagctcttagactgaatcttgagcaccaggtaaggagaatgcctgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cataaactttttatagctcttagactgaatcttgagcaccaggtaaggagaatgcctgga 436
Query: 181 caaagagattagggtaaagcattgctgaaagaaagcagggggttttcctgaagggtaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 caaagagattagggtaaagcattgctgaaagaaagcagggggttttcctgaagggtaagg 376
Query: 241 tcagcatagggccctcactgatccgctttgggcaagtctccagacctcctagcttgaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcagcatagggccctcactgatccgctttgggcaagtctccagacctcctagcttgaggg 316
Query: 301 gaaactggtcctaattatggaagcgctgaggaaagagaggtacatccagagggctaagga 360
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 315 gaaactggtcctaattatgggagcgctgagcaaagagaggtacatccagagggctaagga 256
Query: 361 aatcaaagaaacttcctgctgtgtaattccacgtaacgtgcgtttaacatggtcc 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aatcaaagaaacttcctgctgtgtaattccacgtaacgtgcgtttaacatggtcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_f16.g1 MSMg01no061_f16.g1 CHROMAT_FILE:
MSMg01no061_f16.g1 PHD_FILE: MSMg01no061_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:18 2005
(415 letters)
>mm_chr5_71392265_71393080
Length = 816
Score = 774 bits (400), Expect = 0.0
Identities = 412/416 (99%), Gaps = 1/416 (0%)
Strand = Plus / Plus
Query: 1 acccttgggtccatttgggatgggaatcgtctctgttcgaagtgcccagttacttcccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccttgggtccatttgggatgggaatcgtctctgttcgaagtgcccagttacttcccga 260
Query: 61 gcttctttccttacttttcatcttctgagattgttttctcagttagttttttgttttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttctttccttacttttcatcttctgagattgttttctcagttagttttttgttttcct 320
Query: 121 ttcctagacatccatgccatccacgttatgtaactggttgatgtggccatgtcatgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcctagacatccatgccatccacgttatgtaactggttgatgtggccatgtcatgtttt 380
Query: 181 cttatgctctgtttacattctgtaaagttgagaggaaagtctaaattgattttaggttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttatgctctgtttacattctgtaaagttgagaggaaagtctaaattgattttaggttcc 440
Query: 241 tggtattttttttcctttgtctcctggtttgccaattggacagatatttaaaaggaacga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 tggtattttttttcctttgtctcctggtttgccaattggacagatatttaaaaggaatga 500
Query: 301 gcttttgattctggtgacgtgttatcgcttttatgttatctactttttt-atttcttctc 359
||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||
Sbjct: 501 gcttttgattctggtgacgtgttattgcttttatgttatctattttttttatttcttctc 560
Query: 360 tattcttatttacttccctctagaggcattttgtttagctgtttttcctttctgat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattcttatttacttccctctagaggcattttgtttagctgtttttcctttctgat 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 816
Length adjustment: 9
Effective length of query: 406
Effective length of database: 807
Effective search space: 327642
Effective search space used: 327642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
