Query= MSMg01no063_n09.b1 MSMg01no063_n09.b1 CHROMAT_FILE:
MSMg01no063_n09.b1 PHD_FILE: MSMg01no063_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:21 2005
(370 letters)
>mm_chr5_150798888_150799659
Length = 772
Score = 607 bits (314), Expect = e-178
Identities = 355/370 (95%), Gaps = 6/370 (1%)
Strand = Plus / Plus
Query: 5 gaattcagttc--tccggagcactggagaa-tcacaacactgtgcagcttgcagaaaggg 61
||||||||||| | |||||||||||||| || |||||| |||||||||||||||||||
Sbjct: 205 gaattcagttcagt--ggagcactggagaactcccaacaccgtgcagcttgcagaaaggg 262
Query: 62 agcacattcttacaaaaa-aacaaaacctattcaaattaaaacaaatatcaggggctgca 120
| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aacacattcttagaaaaataacaaaacctattcaaattaaaacaaatatcaggggctgca 322
Query: 121 ttactccccgagtcagagagagaaaatgtcttgccctttagaacatctatacatcatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttactccccgagtcagagagagaaaatgtcttgccctttagaacatctatacatcatcaa 382
Query: 181 aacttgtaaatttagagctagagagatggctcagtggttaagagccctggctatgcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aacttgtaaatttagagctagagagatggctcagtggttaagagccctggctatgcttgc 442
Query: 241 caaggacccagattcaattcccagcacctacatagcacatcagtaattccagttctgggg 300
|||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 443 caaggacccagattcagttcccagcacctacataacgcatcagtaattccagttctgggg 502
Query: 301 atccagtgccctctcctggactctgtgggtactgcacacgtgtggcgtacttgcagacta 360
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 503 atccagtgccctctcctggactctgtgggtactgcacacgtgtggtgtacttgcagacaa 562
Query: 361 aattaccata 370
||||||||||
Sbjct: 563 aattaccata 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 772
Length adjustment: 9
Effective length of query: 361
Effective length of database: 763
Effective search space: 275443
Effective search space used: 275443
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_n09.g1 MSMg01no063_n09.g1 CHROMAT_FILE:
MSMg01no063_n09.g1 PHD_FILE: MSMg01no063_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:22 2005
(278 letters)
>mm_chr5_150953467_150954144
Length = 678
Score = 538 bits (278), Expect = e-157
Identities = 278/278 (100%)
Strand = Plus / Minus
Query: 1 ataacacacggtacgaaggtgcttcgagtggaggctgataactactacgtgactcgggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ataacacacggtacgaaggtgcttcgagtggaggctgataactactacgtgactcgggga 515
Query: 61 aatcatttaattaatatttctgagcctcactttcttgcaaagataacactgtctttcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aatcatttaattaatatttctgagcctcactttcttgcaaagataacactgtctttcccc 455
Query: 121 aggaggctgtgcattggtgtgtgcacccaggatgttagttattaattactgttattctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aggaggctgtgcattggtgtgtgcacccaggatgttagttattaattactgttattctag 395
Query: 181 ctataagaggacgccactttgacatgtcatcagcgcacacaaagcggtgatgcagctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctataagaggacgccactttgacatgtcatcagcgcacacaaagcggtgatgcagctctc 335
Query: 241 ctgatctccctcagcagtcagccatgttcctgccaagc 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctgatctccctcagcagtcagccatgttcctgccaagc 297
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
