Query= MSMg01no066_p17.b1 MSMg01no066_p17.b1 CHROMAT_FILE:
MSMg01no066_p17.b1 PHD_FILE: MSMg01no066_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:57 2005
(452 letters)
>mm_chr5_96998972_96999824
Length = 853
Score = 820 bits (424), Expect = 0.0
Identities = 442/448 (98%), Gaps = 1/448 (0%)
Strand = Plus / Minus
Query: 6 aaactagctatatctttaacgaataacatcatttttcctttctctttctcttc-aaatct 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 653 aaactagctatatctttaacgaatagcatcatttttcctttctctttctcttcaaaatct 594
Query: 65 tgactctcgttcacactaatcaggattatccctcgtcttggaggttaacaatcaccaagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tgactctcgttcacactaatcaggattatccctcgtcttggaggttaacaatcaccaagg 534
Query: 125 ggctgttgtcaggtttgaaggttttcaagggcctgatgtttttaatgcctcatatatagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggctgttgtcaggtttgaaggttttcaagggcctgatgtttttaatgcctcatatatagc 474
Query: 185 atactcaatatttgttttgtaaaacccagagagccagtttggccaaggtactgtaattaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 atactcaatatttgttttgtaaaacccagagagccagtttggccaaggtactgtaattaa 414
Query: 245 atataaggtcacattgcttttcccttggcacttcttcagtggaaccctgattagccaaaa 304
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 413 atataaggtcgcattgcttttcccttggcacttcttcagtggaactctgattagccaaaa 354
Query: 305 caaggtgagggggaaggcagatgctaccgtgggaaaccggagcctgcagatggaaactat 364
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 caaggtgaggaggaaggcagatgctaccgtgggaaaccggagcctgcagatggaaactat 294
Query: 365 taattaggaaatacaaatggacgaaatgccacttgttttgagataggctatgctagaaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 taattaggaaatacaaatggacgaaatgccacttgttttgagataggctatgctagaaga 234
Query: 425 gaagcagagtggagctggccagttgcag 452
||||||||||||||||||||| ||||||
Sbjct: 233 gaagcagagtggagctggccatttgcag 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 853
Length adjustment: 10
Effective length of query: 442
Effective length of database: 843
Effective search space: 372606
Effective search space used: 372606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_p17.g1 MSMg01no066_p17.g1 CHROMAT_FILE:
MSMg01no066_p17.g1 PHD_FILE: MSMg01no066_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:57 2005
(551 letters)
>mm_chr5_96868583_96869533
Length = 951
Score = 1050 bits (543), Expect = 0.0
Identities = 549/551 (99%)
Strand = Plus / Plus
Query: 1 ctggttcctcttggcaggatttcccaccctgtctgcctaactcctcaaccaggaagtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggttcctcttggcaggatttcccaccctgtctgcctaactcctcaaccaggaagtttt 260
Query: 61 ctttgtgtcagactggaagtctttggtcttctcatggtgctgggatcaaatgcaaggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttgtgtcagactggaagtctttggtcttctcatggtgctgggatcaaatgcaaggcct 320
Query: 121 ggggcttgctaggcaaggggaatggccttttgatttttcactagatgccagctctaggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggcttgctaggcaaggggaatggccttttgatttttcactagatgccagctctaggct 380
Query: 181 cagtgctgggatataggatgacagaaccctacaggagcagtcccagagaactgggtgctg 240
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 381 cagtgctgggatataggatgacagaacccttcaggagcagtcccagaggactgggtgctg 440
Query: 241 gcacacacaggccctgagccttccagaagagacttctgccagaagagaaaacaggtgcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacacacaggccctgagccttccagaagagacttctgccagaagagaaaacaggtgcca 500
Query: 301 cctcaccgtttcatcttgagaagcttttcctgtcaaccacttagacatgattttctgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctcaccgtttcatcttgagaagcttttcctgtcaaccacttagacatgattttctgaac 560
Query: 361 atgaacagggctcggctgtacttaagtgacttttgtcatcctcggattcaatctctcccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgaacagggctcggctgtacttaagtgacttttgtcatcctcggattcaatctctcccg 620
Query: 421 ttttggaaaagaaaatgatgtgaaatttgtgacagtctaatgccatctcttacagaagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttttggaaaagaaaatgatgtgaaatttgtgacagtctaatgccatctcttacagaagca 680
Query: 481 ggagaaagtggtcaggggctctttataggacccactgtttacattggtcaagggttactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggagaaagtggtcaggggctctttataggacccactgtttacattggtcaagggttactt 740
Query: 541 atcaaatatga 551
|||||||||||
Sbjct: 741 atcaaatatga 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
