Query= MSMg01no067_i05.b1 MSMg01no067_i05.b1 CHROMAT_FILE:
MSMg01no067_i05.b1 PHD_FILE: MSMg01no067_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:38 2005
(267 letters)
>mm_chr5_93508475_93509142
Length = 668
Score = 402 bits (208), Expect = e-117
Identities = 255/280 (91%), Gaps = 19/280 (6%)
Strand = Plus / Minus
Query: 5 gaattccagggctttgc-c-gagagaccctatctcag--------------aaaaaaaaa 48
|||||||||||| ||| | |||||| |||||||||| |||||||||
Sbjct: 517 gaattccagggc--tgcgctgagagaacctatctcaggaaaaaaaaaaaaaaaaaaaaaa 460
Query: 49 aaaaaaag-actggagccatacactataacccacagaagagtgttggcctctatgtgata 107
|||||||| ||||||||||||||||| || | ||||||||||||||||||||||||||
Sbjct: 459 aaaaaaagtactggagccatacactagaaagtagagaagagtgttggcctctatgtgata 400
Query: 108 ttgtcagcctccccatcagcatctcccctacctttaatacctgagtacacttccctgtca 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttgtcagcctccccatcagcatctcccctacctttaatacctgagtacacttccctgtca 340
Query: 168 ctcaaagcagggctaggcctcagtcagaggccaaggtccaggagtgaactcttccccttt 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ctcaaagcagggctaggcctcagtcagaggccaaggtccaggagtgaactcttccccttt 280
Query: 228 cacgttgttgtcgaggtctcctcattttgaagtatattcc 267
||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cacgttgttgtcgaggtctcctcattttgaagtatattcc 240
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 668
Length adjustment: 9
Effective length of query: 258
Effective length of database: 659
Effective search space: 170022
Effective search space used: 170022
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_i05.g1 MSMg01no067_i05.g1 CHROMAT_FILE:
MSMg01no067_i05.g1 PHD_FILE: MSMg01no067_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:38 2005
(119 letters)
>mm_chr5_93376167_93376685
Length = 519
Score = 207 bits (107), Expect = 2e-58
Identities = 116/119 (97%)
Strand = Plus / Plus
Query: 1 cctgctgtgaatcctagttcttctattcatttaactgtatcttaagaaactgaatgtttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgctgtgaatcctagttcttctattcatttaactgtatcttaagaaactgaatgtttc 260
Query: 61 tggcctttaaacacatgcttgatcatgcatgacatactcatgtacttatgtacacatgg 119
||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tgggctttaaacacatgcttaatcatgcatgacatactcatgtacttatgtgcacatgg 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
