Query= MSMg01no067_o15.b1 MSMg01no067_o15.b1 CHROMAT_FILE:
MSMg01no067_o15.b1 PHD_FILE: MSMg01no067_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:10 2005
(319 letters)
>mm_chr5_81788389_81789108
Length = 720
Score = 567 bits (293), Expect = e-166
Identities = 308/313 (98%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 8 gaattcc-cataacattgctatgtaaatttagattgcttcagtgcaactactcttcattt 66
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gaattccacataacattgatatgtaaatttagattgcttcagtgcaactactcttcattt 461
Query: 67 gcataagctaatttcaccatgggctgttaactctgctcctggcttaggaacatggaagcc 126
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 460 gcataagctaatttcaaaatgggctgttaactctgctcctggcttcggaacatggaagcc 401
Query: 127 ccaagatgtcagtcctaggagttaattgagaagttgagagagcttgggccaagtctacaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ccaagatgtcagtcctaggagttaattgagaagttgagagagcttgggccaagtctacaa 341
Query: 187 aacatcctgttgcctagacactgattagcctagcacttccactgggcaagacattgagaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aacatcctgttgcctagacactgattagcctagcacttccactgggcaagacattgagaa 281
Query: 247 caggatcagcacttgagtgaagcctgcacaatgaaattagataattgaaatttcctttca 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 caggatcagcacttgagtgaagcctgcacaatgaaattagataattgaaatttcctttca 221
Query: 307 actgcacttgtga 319
|||||||||||||
Sbjct: 220 actgcacttgtga 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_o15.g1 MSMg01no067_o15.g1 CHROMAT_FILE:
MSMg01no067_o15.g1 PHD_FILE: MSMg01no067_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:10 2005
(463 letters)
>mm_chr5_81623970_81624832
Length = 863
Score = 857 bits (443), Expect = 0.0
Identities = 458/463 (98%)
Strand = Plus / Plus
Query: 1 caggaaatatgtgatgaatggttacagtttgtctttttaattttgctctgtcagaactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggaaatatgtgatgaatggttacagtttgtctttttaattttgctctgtcagaactgt 260
Query: 61 aaaatatgagccatatttatcatctgttactgattttataaattggcaattcattacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaatatgagccatatttatcatctgttactgattttataaattggcaattcattacttt 320
Query: 121 ccatcaatatctatttttgttgtctcttatacgtgattaattataatgcttgttcaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatcaatatctatttttgttgtctcttatacgtgattaattataatgcttgttcaaagc 380
Query: 181 atggattatttttatccttatctaacacaaatcaaggttttagaaccaaagtatttccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggattatttttatccttatctaacacaaatcaaggttttagaaccaaagtatttccat 440
Query: 241 ctctttctcatgtcctctgataaattgcagtgatttctagggtattgcttttatgctatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctttctcatgtcctctgataaattgcagtgatttctagggtattgcttttatgctatt 500
Query: 301 ttgaaccatgtacaactctaaggtgatgaagatatcaacagatgcattaattgaactaaa 360
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 501 ttgaaccatgtacaactctaatgtgatgaagatatcaacagatgcattaattgaaccaag 560
Query: 361 acatcttaaacaattagatttttgagtgctttctttcaatgaaatcatatactcaaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatcttaaacaattagatttttgagtgctttctttcaatgaaatcatatactcaaaata 620
Query: 421 ctcataatagctgtttttgaatgttcattttagaataaattta 463
|||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 ctcacaatagctgtttttgaatgttcattttaaaataaattta 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
