Query= MSMg01no067_p21.b1 MSMg01no067_p21.b1 CHROMAT_FILE:
MSMg01no067_p21.b1 PHD_FILE: MSMg01no067_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:16 2005
(292 letters)
>mm_chr5_132560784_132561476
Length = 693
Score = 536 bits (277), Expect = e-157
Identities = 289/295 (97%), Gaps = 5/295 (1%)
Strand = Plus / Minus
Query: 1 taaagacctaattcatgaggagtaggtattggtggcagggcagagcc---tttccatata 57
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 493 taaagacctaattcatgaggagtaggtattggtggcagggcagagcctttttt--atata 436
Query: 58 cattggctctgaaaagtaattcagtaaccagaaaatcgtaaatgtcccaaaaacctcatt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cattggctctgaaaagtaattcagtaaccagaaaatcgtaaatgtcccaaaaacctcatt 376
Query: 118 acgtaagcaagatcagaaaatataagacactgacctcaaaaggaataattaaggttatga 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 acgtaagcaagatcagaaaatataagacactgacctcaaaaggaataattaaggttatga 316
Query: 178 aactaaatttatttccccttcaccagctgagaaagtacattttcatgagatggctggttg 237
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agctaaatttatttccccttcaccagctgagaaagtacattttcatgagatggctggttg 256
Query: 238 acaataacttcttggtgagatttggtggtgaagagtattttgttgaacttatttc 292
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acaataacttcttggtgagatttggtggtgaagagtattttgttgaacttatttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_p21.g1 MSMg01no067_p21.g1 CHROMAT_FILE:
MSMg01no067_p21.g1 PHD_FILE: MSMg01no067_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:16 2005
(248 letters)
>mm_chr5_132415714_132416360
Length = 647
Score = 435 bits (225), Expect = e-126
Identities = 240/245 (97%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 tctcagaagcatggggaacatgagatgctggttaactgagcatttatgaacagactcctg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcagaagcacggggaacatgagatgctggttaactgagcatttatgaacagactcctg 260
Query: 61 tgagatacagtgagacaaaaacacattccctttcctacaggtaatgggattggctgctcc 120
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 taagatacagtgagacaaaaacacattccctttcctacagggaatgggattggctgctcc 320
Query: 121 tggatttcatttggggactggttttattttgaaaggaaatttatatatgctggccagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggatttcatttggggactggttttattttgaaaggaaatttatatatgctggccagcag 380
Query: 181 tgtccaattccataaaggctaacccaaggttctatttacttttttttttaatttgctgtg 240
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 381 tgtccaattccataaaggctaacccaaggttctttttacttttttttt-aatttgctgtg 439
Query: 241 catga 245
|||||
Sbjct: 440 catga 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 647
Length adjustment: 9
Effective length of query: 239
Effective length of database: 638
Effective search space: 152482
Effective search space used: 152482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
