Query= MSMg01no068_e12.b1 MSMg01no068_e12.b1 CHROMAT_FILE:
MSMg01no068_e12.b1 PHD_FILE: MSMg01no068_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:39 2005
(245 letters)
>mm_chr5_37630344_37630988
Length = 645
Score = 420 bits (217), Expect = e-122
Identities = 243/263 (92%), Gaps = 18/263 (6%)
Strand = Plus / Minus
Query: 1 accatggttcacaacaatgtgtaactccagacccaggagatcttacaccaccctcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 accatggttcacaacaatgtgtaactccagacccaggagatcttacaccaccctcttctg 509
Query: 61 gcctctccaggtatctgtgtacatatgctcccatgcatacgttctcacact--------- 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gcctctccaggtatctgtgtacatatgctcccatgcatacgttctcacactcacacacac 449
Query: 112 ---------cacacacacacacacagcataccatcacacaggtgaatacataaataacaa 162
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 acacacacacacacacacacacacagcataccatcacacaggtgaatacataaataacaa 389
Query: 163 tgaaataaatcttttaaaaggaagaaatgaaaggcctgtagagaggaattggccgttaat 222
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 388 tgaaataaatcttttaaaaggaagaaatgaaaggcctggagagaggaattggccgttaag 329
Query: 223 aaatcttactgctcttgcagagg 245
|||||||||||||||||||||||
Sbjct: 328 aaatcttactgctcttgcagagg 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_e12.g1 MSMg01no068_e12.g1 CHROMAT_FILE:
MSMg01no068_e12.g1 PHD_FILE: MSMg01no068_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:39 2005
(237 letters)
>mm_chr5_37474288_37474924
Length = 637
Score = 437 bits (226), Expect = e-127
Identities = 232/234 (99%)
Strand = Plus / Plus
Query: 1 ttatcattgtttttctgtagctgagctatttcttcttggccttgttttaggattttcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatcattgtttttctgtagctgagctatttcttcttggccttgttttaggattttcttt 260
Query: 61 tccttcatctttggtcagctgcagcttgctgtgtgatatactcacgtgcaagtacaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccttcatctttggtcagctgcagcttgctgtgtgatatactcacgtgcaagtacaatgt 320
Query: 121 gtgtacctatggttgggcgtctgcggttagttggggaagacctcacatagttttacagag 180
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 321 gtgtacctatggttgggcgtctgcggttagttggggaagaccacacatagctttacagag 380
Query: 181 gcctgtggctttttctctcactcttccattcacacctgtgttggctagttttag 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctgtggctttttctctcactcttccattcacacctgtgttggctagttttag 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
