Query= MSMg01no068_i21.b1 MSMg01no068_i21.b1 CHROMAT_FILE:
MSMg01no068_i21.b1 PHD_FILE: MSMg01no068_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:01 2005
(321 letters)
>mm_chr5_49288317_49289037
Length = 721
Score = 596 bits (308), Expect = e-175
Identities = 314/318 (98%), Gaps = 4/318 (1%)
Strand = Plus / Plus
Query: 4 ggaattccagagacctcactgtgttgggagccctgtgattgtgcagtgagggaaatacaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagagacctcactgtgttgggagccctgtgattgtgcagtgagggaaatacaa 263
Query: 64 ggccctcagaacagaaactgcctcattgtaaatgctcagtgaagggtggttatacttcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggccctcagaacagaaactgcctcattgtaaatgctcagtgaagggtggttatacttc-- 321
Query: 124 ttctttctttctttcttcttttctttcttttcttttttaactgtttattgaaccttttta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 --ctttctttctttcttcttttctttcttttcttttttaactgtttattgaaccttttta 379
Query: 184 taccctgatggctcttctaattgctttatatcatttatctcaattaaaccagaaaactca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taccctgatggctcttctaattgctttatatcatttatctcaattaaaccagaaaactca 439
Query: 244 atgagttgagcactaacactgttcccaactcctgtacagacaagaaagaaagaggtatca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgagttgagcactaacactgttcccaactcctgtacagacaagaaagaaagaggtatca 499
Query: 304 tcagtagagctggaactc 321
||||||||||||||||||
Sbjct: 500 tcagtagagctggaactc 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_i21.g1 MSMg01no068_i21.g1 CHROMAT_FILE:
MSMg01no068_i21.g1 PHD_FILE: MSMg01no068_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:01 2005
(291 letters)
>mm_chr5_49337606_49338296
Length = 691
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Minus
Query: 1 cagtgctagtgcttgctttgtccacactttatgaccctagagactcaacagagatatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cagtgctagtgcttgctttgtccacactttatgaccctagagactcaacagagatatttt 431
Query: 61 ctgtggaattggctgctgatggggggaatttgtttttccctgttttatgggtgggaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctgtggaattggctgctgatggggggaatttgtttttccctgttttatgggtgggaaaat 371
Query: 121 gtggatgacctgaccctgaatgatccaccattaagaagccagaagttggagggtatataa 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atagatgacctgaccctgaatgatccaccattaagaagccagaagttggagggtatataa 311
Query: 181 ctccttggcagatctaccatgttcaagactcttgtttagtgctctcatcccagggagaag 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 310 ctccttggcagatctaccatgttcaagactcttgtttagtgctctcataccagggagaag 251
Query: 241 aaaagaacacagaagtatccaagggtctgacaatggtctatactaatctg 290
||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 250 aaaagaacacagaagtatccaagggtctgacgatggtctatactaatctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
