TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTGTTCAGTTCTCGAGCCCCATTTTTTAATGGGGTTATTTGATTTT
CTGAAGTCCACCTTCTTGAGTTATTTATATATGTTGGATATTAGTCCCCT
ATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGGCTTT
TTGTCTTATTGACGGTGTATTTTGCCTTGCAGAAACTTTGGAGTTTCATT
AAGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCT
GTTCAGGAATTTTTCCCCTGTGACCATATCTTCAAGGCTTTTCCCCACTT
TCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATC
CACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGAATCAATTCGCAT
TCTTCTACACGATAACAACCAGTTGTGCCAGTACCAATTGTTGAAAATGC
TGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGA
CCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTC
TACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTC
TGTTATAAAGCTTCTGGTCAGGCATGGTGATTC

TCCCTCTCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAAACAGATTCTTAAGGGC
TGTATTTTTGTATTGAAAGCCCATGAGTTTACTTTCAATAATAATGAAAA
ACGCAAAAACGCTTTGTAAGCCCAATATAAAAGTAGGCAAGCTAAGTTAA
CACCTATGTCTTTGCATACAATAGTACATTTGAACAAATACATAAAGAAG
TCATGAATAAATGTTGACTGTATTTCACAAGGTATTTTGGAAAATGAAAA
CAATGAGCAATACTTTATAGATTATATGCCACAGTACAGTAAAAATAATA
GGAAGACAGCAAAGATTAAGAAATATATTTTCACAGTCTTGTATATTGAC
CATAACAAACTTGAAACAACTGAAAGTCTTTGTTTTTAATTTTAGTTTTC
AGTATCCATATTATCTTCTCTCCCTCAGATATCTCCGATATCTCCCCTGT
TCCTTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCC
TCTCTCTCTCTCTCTCTCTCTCTCATGTGTGCAAATAGGTATCTGCGATG
AGTATCTGCGTATTTATGCGCCTTTTTCTGTTTCTTTCCCTCTCCTTCTC
TCCCTAACTTCTTTTTTATATTCACCCCTTTTAGTTATT

Query= MSMg01no068_l03.g1 MSMg01no068_l03.g1 CHROMAT_FILE:
MSMg01no068_l03.g1 PHD_FILE: MSMg01no068_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:13 2005
         (506 letters)



>mm_chr5_82783390_82784296
          Length = 907

 Score =  783 bits (405), Expect = 0.0
 Identities = 443/461 (96%), Gaps = 12/461 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaaaac-agatt-cttaagggctgtatttttgtattgaaagcccatgagtttactttca 58
           ||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaaacaag-ttccttaagggctgtatttttgtattgaaagcccatgagtttactttca 259

                                                                       
Query: 59  ataataatgaaaaacgcaaaaacgctttgtaagcccaatataaaagtaggcaagctaagt 118
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 260 ataataatgaaaaacgcaaaaatgctttgtaagcccaatataaaagtaggcaagctaagt 319

                                                                       
Query: 119 taacacctatgtctttgcatacaatagtacatttgaacaaatacataaagaagtcatgaa 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 taacacctatgtctttgcatacaatagtacatttgaacaaatacataaagaagtcatgaa 379

                                                                       
Query: 179 taaatgttgactgtatttcacaaggtattttggaaaatgaaaacaatgagcaatacttta 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taaatgttgactgtatttcacaaggtattttggaaaatgaaaacaatgagcaatacttta 439

                                                                       
Query: 239 tagattatatgccacagtacagtaaaaataataggaagacagcaaagattaagaaatata 298
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tagattatatggcacagtacagtaaaaataataggaagacagcaaagattaagaaatata 499

                                                                       
Query: 299 ttttcacagtcttgtatattgaccataacaaacttgaaacaactgaaagtctttgttttt 358
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtttcacagtcttgtatattgaccataacaaacttgaaacaactgaaagtctttgttttt 559

                                                                       
Query: 359 aattttagttttcagtatccatattatcttctctccctcagatatctccgatatctcccc 418
           |||||||||||||||||||||||||||||||||||||||||||||||||         ||
Sbjct: 560 aattttagttttcagtatccatattatcttctctccctcagatatctcc---------cc 610

                                                    
Query: 419 tgttccttctccctctctctctctctctctctctctctctc 459
           ||||||||||| ||||||| | |||||||||||||||||||
Sbjct: 611 tgttccttctctctctctcgccctctctctctctctctctc 651


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 907
Length adjustment: 10
Effective length of query: 496
Effective length of database: 897
Effective search space:   444912
Effective search space used:   444912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)