CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGG
AATTCCATGTCACTTTCCAAGATGAATTAATGCCAATATTTCTCAAATTA
TTCCATACAATTGAAACAGAAATGTAACATTTACCAATTCATTTTATGAA
GTTAAGGTTACACGATACCTAAAAAAGCAAGTAAGAAAGAAACTTATGGA
CATAGATACAAAAATATCTGGATAAAATGCTTGCAAATTTAGTCCAAGAA
TGCATAAATTATCACCAAGTCAGTTCATTCAAGAAATGAAGAGCTCAAAA
TACATTAGTTGATATATGTAATAATCATATTCAAAGAAAAAAATCACACT
GTTATCTTGTTCAATACAAAGTCCTTTGACAATAATCCAATACCTCTTCA
TGGCAAGATACTTCAAGAAACTATGGATATGAGGAATATTTCTCAAAATA
ATAGAGATAATTAGCAGCAAACATATAGGCAATACCAAACTAAATGTAGG
CAATTTCAAGGAATTTTCACTAAAATCATGAATAAGACAAGATTGGGAAT
GACATGTCTTTTATCACTCTGACGGTAATATAGACACATCCTTAGTATAT
ACCTTAAATTCCAAACAATGATGAGAAAGTTAGTCTGTAGAAGGAAGCAT
CCATGTTTGAAAGTAATATCTAGTTGAGGGATGGACAAAGTGATTAATCA
CACAAAGATTTGG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGAAAAATTTAAGCCATGAATTTAGG
TTTCTACTATGGCTGGAGTAATTTATATTTCAATCAATATGGCATAAGAG
CTCTTATTTTCTACCGGTAAATTTTGCAGTTTTTTTTCTTTGTGTGAATG
TCTGTGTGTCCATTTTGTGTAGGATACTTTTATTTTCAGACTTACATTTT
TACTACCAAAAGAGAGAGCTTGAGCTCACAATTTCTCCCATCTCAACCTC
TCCAATGTGAACATTTTAAGGTACATATTTAGTAATTTCTTGTCTTATAT
TGAGAAGTACTGCTCATTTTATTAACCCATTTGTTGACTGACAAATTAAT
ATTTTGATGTTTCGTTATGCACTCTTTTATATACCCAACATCTTAGATGA
AACTTTGAGGTATAGCTGTCAATGATTTTTCTCATGTTCTTGGATCAGTG
AGATGTCTCAATGGGTAAAGCATATGCACTATAAAGTCTAACAACCTGTA
ATAGCTCACCAGATCCTAAAACTGGCTGCAAAAACCTTCCAAAAGCAGAG
CTGGTTTTCAGAATCAGTTATCTTCACTAGCAGAAACAGCTTCATCTTGG
AACATGCAAGAATGTAAATGCTTGAGCTCACACATAGTGTTAAT

Query= MSMg01no072_d15.g1 MSMg01no072_d15.g1 CHROMAT_FILE:
MSMg01no072_d15.g1 PHD_FILE: MSMg01no072_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:53 2005
         (609 letters)



>mm_chr5_48130208_48131217
          Length = 1010

 Score = 1141 bits (590), Expect = 0.0
 Identities = 605/610 (99%), Gaps = 1/610 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgaaaaatttaagccatgaatttaggtttctactatggctggagtaatttatatttcaa 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 729 ctgaaaaatttaagccatgaatttaggtttccactatggctggagtaatttatatttcaa 670

                                                                       
Query: 61  tcaatatggcataagagctcttattttctaccggtaaattttgcag-ttttttttctttg 119
           ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 669 tcaatattgcataagagctcttattttctaccggtaaattttgcagtttttttttctttg 610

                                                                       
Query: 120 tgtgaatgtctgtgtgtccattttgtgtaggatacttttattttcagacttacattttta 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tgtgaatgtctgtgtgtccattttgtgtaggatacttttattttcagacttacattttta 550

                                                                       
Query: 180 ctaccaaaagagagagcttgagctcacaatttctcccatctcaacctctccaatgtgaac 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ctaccaaaagagagagcttgagctcacaatttctcccatctcaacctctccaatgtgaac 490

                                                                       
Query: 240 attttaaggtacatatttagtaatttcttgtcttatattgagaagtactgctcattttat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 489 attttaaggtacatatttagtaatttcttgtcttatattgagaagtactgctcatttcat 430

                                                                       
Query: 300 taacccatttgttgactgacaaattaatattttgatgtttcgttatgcactcttttatat 359
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 429 taacccatttgttgactgacaaattaatattttgatgtttcgttatgtactcttttatat 370

                                                                       
Query: 360 acccaacatcttagatgaaactttgaggtatagctgtcaatgatttttctcatgttcttg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 acccaacatcttagatgaaactttgaggtatagctgtcaatgatttttctcatgttcttg 310

                                                                       
Query: 420 gatcagtgagatgtctcaatgggtaaagcatatgcactataaagtctaacaacctgtaat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gatcagtgagatgtctcaatgggtaaagcatatgcactataaagtctaacaacctgtaat 250

                                                                       
Query: 480 agctcaccagatcctaaaactggctgcaaaaaccttccaaaagcagagctggttttcaga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agctcaccagatcctaaaactggctgcaaaaaccttccaaaagcagagctggttttcaga 190

                                                                       
Query: 540 atcagttatcttcactagcagaaacagcttcatcttggaacatgcaagaatgtaaatgct 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atcagttatcttcactagcagaaacagcttcatcttggaacatgcaagaatgtaaatgct 130

                     
Query: 600 tgagctcaca 609
           ||||||||||
Sbjct: 129 tgagctcaca 120


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1010
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1000
Effective search space:   599000
Effective search space used:   599000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)