Query= MSMg01no072_e05.b1 MSMg01no072_e05.b1 CHROMAT_FILE:
MSMg01no072_e05.b1 PHD_FILE: MSMg01no072_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:56 2005
(385 letters)
>mm_chr5_151855988_151856772
Length = 785
Score = 650 bits (336), Expect = 0.0
Identities = 371/388 (95%), Gaps = 12/388 (3%)
Strand = Plus / Minus
Query: 5 ggaattcagtgataaccccaggaatgcaaagagcttttcttgagaattctgttcttatga 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ggaattcagtgataagcccaggaatgcaaagagcttttcttgagaattctgttcttatga 723
Query: 65 ccacagaatgtacccgtgtttaatttcccctgtgatctatg-------catgtacagact 117
||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 722 ccacagaatgtacccgtgtttaatttcccctgtgatctatgcagctgacatgtacagact 663
Query: 118 ccaactgtcctctaatggcttggaattctccccatgttcctgtagttttttttttttttt 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ccaactgtcctctaatggcttggaattctccccatgttcctgtagtttttttttttttt- 604
Query: 178 tccttttctctctttttttttccccaagttaaggttgctttcatttatagcaacaagcaa 237
||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 603 --cttttctct-ttttttttt-cccaagttaaggttgctttcatctatagcaacaagcaa 548
Query: 238 gagataccagggcatggcaaccatacacatgtatttctctgggtatctatgaaaaagaga 297
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 547 gagacaccagggcatggcaaccatacacatgtatttctctgggtatctatgagaaagaga 488
Query: 298 aatgaccactggccactgattactggtctggctactcaaaaacattccaccttgctctta 357
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 487 aatgaccactggccactgattactggtctggctactcagaaacattccaccttgctctta 428
Query: 358 aagaagtgagctaatctgtatgccactg 385
||||||||||||||||||||||||||||
Sbjct: 427 aagaagtgagctaatctgtatgccactg 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_e05.g1 MSMg01no072_e05.g1 CHROMAT_FILE:
MSMg01no072_e05.g1 PHD_FILE: MSMg01no072_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:56 2005
(272 letters)
>mm_chr5_151729991_151730661
Length = 671
Score = 516 bits (267), Expect = e-151
Identities = 270/271 (99%), Gaps = 1/271 (0%)
Strand = Plus / Plus
Query: 1 tgatcattttacttttgctactttgaaagataacaatgaccctaatgaaactcactgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 tgatcattttacttttgctactttgaaagataacaatgaccctaatgaaactcactg-ga 259
Query: 61 ccatcaaaaaggacagaaagaaatcagaaatgagcccagctgggaagaggaggattacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccatcaaaaaggacagaaagaaatcagaaatgagcccagctgggaagaggaggattacca 319
Query: 121 atgggaggcagaggagagtgaggacctgggtgtgaatacaagcaaaatacaaagtacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgggaggcagaggagagtgaggacctgggtgtgaatacaagcaaaatacaaagtacagg 379
Query: 181 tgtgtgaccaggcccaaccccagttcaaggtaacatccatgtacagtatcttagtttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtgtgaccaggcccaaccccagttcaaggtaacatccatgtacagtatcttagtttgtt 439
Query: 241 tcttattggggagggaagggtgtattgttag 271
|||||||||||||||||||||||||||||||
Sbjct: 440 tcttattggggagggaagggtgtattgttag 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 671
Length adjustment: 9
Effective length of query: 263
Effective length of database: 662
Effective search space: 174106
Effective search space used: 174106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
