CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGTACACATCTCTATTTAGTATTGGACCCACAGTTACGGAATCTTG
CGTGAATTTGTTTTGAAATATCTGATAAAGATATAGAACTCTTATCATCT
TCCTGGGGATATATGCAAAAATTGTTTAAACTGTTGAAGCTTCAGTTTCC
CCACAAAAACAGAGGTAATCTAGAAATACTTTAGAAAATGGAGCAGGAAG
AAGGTAACATAATCACAATGAATGCCTGTTTTCAAAACTAGTTGGGCATG
TATTAATGTATTTGTAACATTATTTACACACGGTGTTATATATATTTCTC
AATTTTTGTCTGTACTGGTATCAGTCTGGTCACGGTGAGGCAGCCTCACT
CCCCTTCTCCACCCAGATTACTCCAACTTCTGTTGACACTGTTTTGGTAA
ATAAATATGTACCAATATGATGGTGCTTCTTTACTTTCAATCTGATGGTG
ACTTTTAAATTGCAAAGTTTTTTTTTTTTTTTTTTTAAGATTCATTTATT
TATTATATATGTAAGTACACTGTAGCTATCCTCAGATACTCCAGAAGAGG
GCATTAGATTTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGA
TTTGAACTCGGGACCTTTGGAAGAGCAGTCGGTGCTCTTAACCACTG

CAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTAAGGAAGTGTTGTGTTTTCTCT
TTAAGAACTTCTACTTGTTTACCTCTGTTTTTCTTTATTTCTTTAAAGGA
GTTCATTTTGTCCTTCTTAAAGTCCTCCATCATCCTTATGAGAAGTGACT
TTAAATCCATATCTCACTTTTCTGGTGTAATGTGTATCCAAGACTTAATA
TGGTGAAAGAATTTGGTTATGATGATGCCAAGTAACCTTGATTTCTTTTG
CTTCTGTTCTTATTCCTTCCTTCTTCCATCTGGTTATCTCAAGTGCTCCC
TGCCCTTGAGATCCTGTCCTTCCTGTAATGCCTGTTGAGTCAGAACTCCT
CAGAGTCCAGCTTTCTCTGTGACCCTGTCATTCTAGGATCCTGTGATCCT
GAGATTCTGAGGGTGTCAGAGTTCCTAGGATTCAAGCTTCCTCTGAGACC
CTGAGATCCTAGTCTGGCCAAGCTCCTGGGATCCTAGTATTCCAGGATCC
CAAGATCCTAGTATCCTGTTATCTTAATATCCTGGGCATGTTAGAGTGCC
TGGGAGTGGTTCCTCATTTTGGAGCCATAGGGCTGTCTTCTGAGTTCACA
ACCAAATTAGATTAGAAGGAAACCAAGCCACTGGTCAGGCGGGGTTCA

Query= MSMg01no072_f09.b1 MSMg01no072_f09.b1 CHROMAT_FILE:
MSMg01no072_f09.b1 PHD_FILE: MSMg01no072_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:02 2005
         (621 letters)



>mm_chr5_61823513_61824533
          Length = 1021

 Score = 1122 bits (580), Expect = 0.0
 Identities = 608/618 (98%), Gaps = 2/618 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagtacacatctctatttagtattggacccacagttacggaatcttgcgtgaat 63
           |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 204 ggaattcagtacacatctctatttagtattggacccacagttacagaatcttacgtgaat 263

                                                                       
Query: 64  ttgttttgaaatatctgataaagatatagaactcttatcatcttcctggggatatatgca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgttttgaaatatctgataaagatatagaactcttatcatcttcctggggatatatgca 323

                                                                       
Query: 124 aaaattgtttaaactgttgaagcttcagtttccccacaaaaacagaggtaatctagaaat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaattgtttaaactgttgaagcttcagtttccccacaaaaacagaggtaatctagaaat 383

                                                                       
Query: 184 actttagaaaatggagcaggaagaaggtaacataatcacaatgaatgcctgttttcaaaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actttagaaaatggagcaggaagaaggtaacataatcacaatgaatgcctgttttcaaaa 443

                                                                       
Query: 244 ctagttgggcatgtattaatgtatttgtaacattatttacacacggtgttatatatattt 303
           |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 444 ctagttgggcatgttttaatgtatttgcaacattatttacacacggtgttatatatattt 503

                                                                       
Query: 304 ctcaatttttgtctgtactggtatcagtctggtcacggtgaggcagcctcactccccttc 363
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 504 ctcaatttttgtctgtactggtatcagtctggtcacgctgaggcagcctcactccccttc 563

                                                                       
Query: 364 tccacccagattactccaacttctgttgacactgttttggtaaataaatatgtaccaata 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tccacccagattactccaacttctgttgacactgttttggtaaataaatatgtaccaata 623

                                                                       
Query: 424 tgatggtgcttctttactttcaatctgatggtgacttttaaattgcaaagtttttttttt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgatggtgcttctttactttcaatctgatggtgacttttaaattgcaaagtttttttttt 683

                                                                       
Query: 484 tttttttttaagattcatttatttattatatatgtaagtacactgtagctatcctcagat 543
           ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttttta--aagattcatttatttattatatatgtaagtacactgtagctatcctcagat 741

                                                                       
Query: 544 actccagaagagggcattagatttcgttacggatggttgtgagccaccatgtggttgctg 603
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agtccagaagagggcattagatttcgttacggatggttgtgagccaccatgtggttgctg 801

                             
Query: 604 ggatttgaactcgggacc 621
           | ||||||||||||||||
Sbjct: 802 gaatttgaactcgggacc 819


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)