AATTTGCGGCGCTAAACGACTCCTATAGGTACAGAATCCGCGGAATTCCA
GGTTCCAGACAACTGCAGAAACTATCTGCAGCTGGAAACTATGCCTTTGC
TAGAGCAGAGAGCAGTAGGCAAATCATAGTTTGTTGTGGATAATATGAAG
CAGCACCATATCCCTCATCTGGGATTTAAACAAAAACATCTCTGTCTCTG
TCTCTGTCTCTGTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTTTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTC
TTTCTCTTTTTCTCTGTGTATTTAAGAAACCAAAATTACAAGATTCTCAC
TGCACCACCTCATTTTCTCTAACTTTAAACACTGAGCTACTATTTAACCT
GCTAGCTGTTTTCATAGTCACTCTTACTCATCTTCTCAGCAAACCAGTTA
GAGAATAATAATTATTACATTTTAAAGATAAGAAAACGGAGGCTTACTAA
CTTATTTGCTTCCCATGCACACACACACACACACACACACACACACACAC
ACACACACACACACACACAGAGCCTGAGTTATAACCCGAGTTTATCTAAC
TGATGAGGCCATGCTTTCTCTACTCGAGTGGTTTATATTACAACACAAAT
TGTATATTGAATGTTCCGTAACAGCCCATGTGTTAAAAGCTTGAT

TGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCATTTTCAGGTGCAATTCCAAATCCCATC
ATGGAGGAGCATGCTCACAGTGACAAAGTTTGAGTTAAGTCACATGGTCC
CAGCCAAGGCTTGCTTTGATTGTAATAACATAAGCAAGTGTCATTTCCAT
GATCTACTTACTGCCAATTTTTCACATTCCTGTGCTTGTTCTGTATGTCT
TGATTATCAAGGTCCCCAAACACAGTGCCTAAGAGCTCTTACTGCTCTCA
GACAGAAGTCTGGATATGTCTCTCAGAGAAAATGGGCATGTTACATGAGT
CTCTTTGACATAGGAGTTAGAGTTATTTTAACTGTGCATTCTCTTTTGGT
GAACTAGTATACATGCTGCAAACGGCATGTTATGTGGGGNGGAGGGGAAT
GGGCTGTTGAAAATGCTTTCACTCCACCCTACCCTTAATTTATCCCCATG
TTCTCCCTTAGACGCTATGACTCCCCCCCTGCCTAATCCCTATTTCTCGT
ACTCTCGTCGACTTACATTATTGTCATTATTCAACAAACTCCATCGCTCC
CTATCAAATTAAACTCCCCCCCCATTACTTTCATTCATCTTATCATACGC
CCTTTTTTTCATTCCCCCTTTCCTTTCATATCTTTCTTCTACAAATTTTT
TATACCATCACCTC

Query= MSMg01no072_k21.b1 MSMg01no072_k21.b1 CHROMAT_FILE:
MSMg01no072_k21.b1 PHD_FILE: MSMg01no072_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:30 2005
         (523 letters)



>mm_chr5_68498035_68498957
          Length = 923

 Score =  509 bits (263), Expect = e-148
 Identities = 411/531 (77%), Gaps = 112/531 (21%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaggttccagacaactgcagaaactatctgcagctggaaactatgcctttgcta 64
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 303 gaattccaggttccagacaactgcagaaactatctgcagctggaaaccatgcctttgcta 362

                                                                       
Query: 65  gagcagagagcagtaggcaaatcatagtttgttgtggataatatgaagcagcaccatatc 124
           |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 363 gagcagagagcagtaggcaaatc--agtttgttgtggataatatgaagcagcaccatatc 420

                                                                       
Query: 125 cctcatctgggatttaaacaaaaacatctctgtctctgtctctgtctctgtctctttctc 184
            |||||||||||||||||||||||||||||||||||||                      
Sbjct: 421 tctcatctgggatttaaacaaaaacatctctgtctctg---------------------- 458

                                                                       
Query: 185 tctctctctctctctctctctctctctctctctttctttctctttctctttctctttctc 244
                                                                       
Sbjct: 458 ------------------------------------------------------------ 458

                                                                       
Query: 245 tttctctttctctttctctttctctttttctctgtgtatttaagaaaccaaaattacaag 304
                   ||||||||||||||      ||||||||||||||||||||||||||||||||
Sbjct: 459 --------tctctttctctttc------tctctgtgtatttaagaaaccaaaattacaag 504

                                                                       
Query: 305 attctcactgcaccacctcattttctctaactttaaacactgagctactatttaacctgc 364
           ||||||||| ||||||||| |||||||||| ||| |||||||||||||||||||||||||
Sbjct: 505 attctcactacaccacctctttttctctaagtttgaacactgagctactatttaacctgc 564

                                                                       
Query: 365 tagctgttttcatagtcactcttactcatcttctcagcaaaccagttagagaataataat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagctgttttcatagtcactcttactcatcttctcagcaaaccagttagagaataataat 624

                                                                       
Query: 425 tattacattttaaagataagaaaacggaggcttactaacttatttgcttc-c-------- 475
           |||||||||||| ||||||||||||||||||||||||||||||||||| | |        
Sbjct: 625 tattacattttagagataagaaaacggaggcttactaacttatttgctgcgcgcgcgcgc 684

                                                              
Query: 476 ---catgcacacacacacacacacacacacacacacacacacacacacaca 523
              |  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcgc--gcacacacacacacacacacacacacacacacacacacacacaca 733


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space:   468369
Effective search space used:   468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)