Query= MSMg01no076_g14.b1 MSMg01no076_g14.b1 CHROMAT_FILE:
MSMg01no076_g14.b1 PHD_FILE: MSMg01no076_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:22 2005
(375 letters)
>mm_chr5_144241699_144242473
Length = 775
Score = 648 bits (335), Expect = 0.0
Identities = 366/381 (96%), Gaps = 9/381 (2%)
Strand = Plus / Minus
Query: 4 cccccctcccactaacaagtcaagcactttagccactgagccttacccactggcacactg 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cccccctcccactaacaaatcaagcactttagccactgagccttacccactggcacactg 476
Query: 64 agatcctaaagctggaccccagcattccatctcctgcgcttccctcgactctgaaaaggc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agatcctaaagctggaccccagcattccatctcctgcgcttccctcgactctgaaaaggc 416
Query: 124 tggatccgtaacatgaagcctttgagcctcgctctgagtgaaaagtctcagcaaagcctt 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tggatccgtaacgtgaagcctttgagcctcgctctgagtgaaaagtctcagcaaagcctt 356
Query: 184 agctgtgtttggcttgatcagtagaggctgagaagtggttttgaggctgtttgaacctcg 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tgctgtgtttggcttgatcagtagaggctgagaagtggttttgaggctgtttgaacctcg 296
Query: 244 aagaaatgttgtctccctggatagtctgcacttactgccatgtgagagactgcaggtcct 303
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 295 aagaaatgttgtctccctggatagtctgcacttagtgccatgtgagagactgcaggtcct 236
Query: 304 aagacactcctggtaaacctggagctcttaacttttt--------ttttcttttttt-ag 354
||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||
Sbjct: 235 aagacactcctggcaaacctggagctcttaactttttatttttatttttattttttttag 176
Query: 355 atttatttatttattatatgt 375
|||||||||||||||||||||
Sbjct: 175 atttatttatttattatatgt 155
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_g14.g1 MSMg01no076_g14.g1 CHROMAT_FILE:
MSMg01no076_g14.g1 PHD_FILE: MSMg01no076_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:22 2005
(222 letters)
>mm_chr5_144089513_144090136
Length = 624
Score = 358 bits (185), Expect = e-103
Identities = 213/223 (95%), Gaps = 2/223 (0%)
Strand = Plus / Plus
Query: 1 gggattccagaagtgaaccaccacacccagcaacactcccttttacgtctttaaatattc 60
||||||||||||||| ||||||||||||||||| || ||||||||| |||||||||||||
Sbjct: 201 gggattccagaagtgcaccaccacacccagcaatacacccttttacatctttaaatattc 260
Query: 61 acagggatactgataaagtcctgcaaaagaacctgc--cgacctcatcagaatgagcaac 118
||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 acatggatactgataaagtcctgcaaaagaacctgcgccgacctcatcagaatgagcaac 320
Query: 119 tcctagaggtactcagggtcccacacccaaacttgggcatatttaacaggtcagtggtca 178
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctagaggtagtcagggtcccacacccaaacttgggcatatttaacaggtcagtggtca 380
Query: 179 tgatgtcacccatcaccctccagaccagaatgacaaaatataa 221
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 tgatgtcacccatcaccctccagaccagaatgatgaaatataa 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 624
Length adjustment: 9
Effective length of query: 213
Effective length of database: 615
Effective search space: 130995
Effective search space used: 130995
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
