Query= MSMg01no076_h17.b1 MSMg01no076_h17.b1 CHROMAT_FILE:
MSMg01no076_h17.b1 PHD_FILE: MSMg01no076_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:28 2005
(337 letters)
>mm_chr5_135247978_135248714
Length = 737
Score = 636 bits (329), Expect = 0.0
Identities = 335/337 (99%)
Strand = Plus / Minus
Query: 1 agtgggattcggctcgtggcccaaatggctggggagggtgggcctggactggaagtggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 agtgggattcggctcgtggcccaaatggctggggagggtgggcctggactggaagtggag 478
Query: 61 ggaacccgttcaggcctaaaggaatagcaaggtctggactggcatttcctcctggggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggaacccgttcaggcctaaaggaatagcaaggtctggactggcatttcctcctggggtgg 418
Query: 121 agagttcttggatgggagtgggaccaggtcagatacctggaaggggactaatcacagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agagttcttggatgggagtgggaccaggtcagatacctggaaggggactaatcacagaga 358
Query: 181 atttacctttgacctttggtggctccacgctggaatccacggctaaggatttgatcttga 240
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 357 atttacctttgacctttggtggctccacgctggaatccagggttaaggatttgatcttga 298
Query: 241 caacctgtccctcactctagaccaagatttctctgattcctagttaagttatttctgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 caacctgtccctcactctagaccaagatttctctgattcctagttaagttatttctgttt 238
Query: 301 tatggggtagggaatggaactcagggcttctcacatg 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 tatggggtagggaatggaactcagggcttctcacatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_h17.g1 MSMg01no076_h17.g1 CHROMAT_FILE:
MSMg01no076_h17.g1 PHD_FILE: MSMg01no076_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:28 2005
(168 letters)
>mm_chr5_135095649_135096216
Length = 568
Score = 311 bits (161), Expect = 1e-89
Identities = 167/169 (98%), Gaps = 2/169 (1%)
Strand = Plus / Plus
Query: 1 cattcttacagtcagctgggtgcccagcaatgtggatggacgggcctgtcttttccgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattcttacagtcagctgggtgcccagcaatgtggatggacgggcctgtcttttccgcat 260
Query: 61 tggagatggattacatcatctgaaagcatcagctttgattacaaccacgcaatgcatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggagatggattacatcatctgaaagcatcagctttgattacaaccacgcaatgcatgtc 320
Query: 121 tgtcttaagttaggtattggtgttacacaaatg-tctcttatctcagaa 168
||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 321 tgtcttaagttaggtattggtgttacacaaatggt-tcttatctcagaa 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 568
Length adjustment: 8
Effective length of query: 160
Effective length of database: 560
Effective search space: 89600
Effective search space used: 89600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
