TTTTTTTTTATAATTTTGNTTNNTTTTTTTTNAAGTANTATTCGGGAGTA
GGAAAGGTTGTTANTTATTTGTAANGCTGTGTGGTGGCAAACGTGGGAGT
ACGTGGCTGAGCTGGGGGGGTTACTCTTCATCATCGACGTCACAACCCTC
CTTAATATCTTATACTATCAAGGCAAACTATGATGTAGAGGGACCCGGCG
GGCAGTTAAAACGTTTACGTCCCGCCCATCACGCGCCACGCTCTAGGAGC
GGCGCCATATATAACAACACGTTTGGCGTCCTTTTTTATCCATCTTCGCC
TTTCTTCCCGTCCCCCGCCACCTGGTAAACGAGGATTAGTAGGTGGAGCG
GCCCGACTATACTCCCCTGTCTATCCGTAAACCCAAATACCACAATAGTA
TGAGGGATGGGGGAGAGGACCGTGGAGCCCTTGCTGTATCGTCGGTGCGG
TTGTGTGCGCTTGCGTTGCGGCGATCGTGGTGTCGCTGTTCATCCCCCAT
ATCCTATCTTCGGCTCTAGATTTGCCGACGTACTACGCACCTCGGTTCAG
TTTTCATCTCGCTCCGTGTTACTCTCCCGCGCGCTCTGCTTTCGCGATGA
TGAGATATTCTATGGAGCCCGCGAATGTCGATTATTATGTATTCGTGACG
CGGAGGGCATTCTTTGAGCGTCGGGATGATGGAGAGAGTGCGATCGAGTG
GACTATTTGTTCAAAGACTCCGGCATGCCTTTTACGTTGTATGCTAGCGA
CGTTAGCGAGCGGGAGATTCCGACGCGCGATCGTAATCGTCTAGTATGGT
AGGTACGACGCGCTGGTATTGAATGTGTTTGTCCGACCACGCGTTTACTT
GAAGAAGATGGAACTGAATTGTATACACCCGTGTATGTTATTGACTGATT
CTTCCTCTGTATATTGCGTCGCATATCTCTTCTCGCGTTG

NTTCATGAAGTGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTACATAACATTCAGGAAAGATATATTTAA
CCTATACATATGGTCCATAGCACCCCAAGAAACCAGAGTCATTGTTAAAC
AATACATGATTCACTTGAGATTAAATTCTTAATAAAAAAAGTTATCTCTT
TTAGAAAAGATTCAGAATAAAATGTTCCCTATCCTTACACTGTATAGTTG
ATGAGACATGGGTGGCTGGAAGAGGAGGGAGGTAGAAGATTGGCTATAGT
GAGAGATGGGAGGTAATCCATTGTCGATGAGGCCATTTTAAATATAAAGA
CCACTCAGAACTTTTTAAGATGTATTGTAGGGGGTGTTATGATTTGATTG
TAAAATGTCCCATAGGGGCTCATGTGTGTTTGAAGATTTGGTCCCTAGGT
ATAAAGCCACTTGGGGACAGTGCTAAATAGTTTTATGTCAATTTGACACA
AACTAAAATTATATGAGAGGTGCAAACCTCAATTAATAAAATGCCTCCAC
AAGATTAGGCTGAAAGCAAGCCTATAGGGCATTTTCTTAGTAATCAATGG
AGAAGGCCCAGCCTATTGTGAGTGGTTCCATCCCTGGACTGATGGTTCTG
GGTTCTCTAAGAT

Query= MSMg01no078_j01.g1 MSMg01no078_j01.g1 CHROMAT_FILE:
MSMg01no078_j01.g1 PHD_FILE: MSMg01no078_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:55 2005
         (533 letters)



>mm_chr5_51808151_51809082
          Length = 932

 Score =  951 bits (492), Expect = 0.0
 Identities = 525/540 (97%), Gaps = 8/540 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctacataacattcaggaaagatatatttaacctatacatatgg-------tccatagcac 53
           |||||||||||||||||||||||||||||||||| ||||||||       |||| |||||
Sbjct: 563 ctacataacattcaggaaagatatatttaacctacacatatggtagcttatccacagcac 504

                                                                       
Query: 54  cccaagaaaccagagtcattgttaaacaatacatgattcacttgagattaaattcttaat 113
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cccaagaaaccagagtcattgttaaacaatacatgattcacttgagattaaattcttaat 444

                                                                       
Query: 114 aaaaaaagttatctcttttagaaaagattcagaataaaatgttccctatccttacactgt 173
            ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 -aaaaaagttatttcttttagaaaagattcagaataaaatgttccctatccttacactgt 385

                                                                       
Query: 174 atagttgatgagacatgggtggctggaagaggagggaggtagaagattggctatagtgag 233
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atagttgatgagacatgggtggctggaagaggagggaggtagaagattggctatagtgag 325

                                                                       
Query: 234 agatgggaggtaatccattgtcgatgaggccattttaaatataaagaccactcagaactt 293
           |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||
Sbjct: 324 agatgggaggtaatccattgccgatggggccattttaaatataaggaccactcagaactt 265

                                                                       
Query: 294 tttaagatgtattgtagggggtgttatgatttgattgtaaaatgtcccataggggctcat 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttaagatgtattgtagggggtgttatgatttgattgtaaaatgtcccataggggctcat 205

                                                                       
Query: 354 gtgtgtttgaagatttggtccctaggtataaagccacttggggacagtgctaaatagttt 413
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gtgtgtttgaagatttggtccctaggtataaagccacttggggacagtgctaaatagttt 145

                                                                       
Query: 414 tatgtcaatttgacacaaactaaaattatatgagaggtgcaaacctcaattaataaaatg 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tatgtcaatttgacacaaactaaaattatatgagaggtgcaaacctcaattaataaaatg 85

                                                                       
Query: 474 cctccacaagattaggctgaaagcaagcctatagggcattttcttagtaatcaatggaga 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 84  cctccacaagattaggctgaaagcaagcctatagggcattttcttagtaatcaatagaga 25


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 932
Length adjustment: 10
Effective length of query: 523
Effective length of database: 922
Effective search space:   482206
Effective search space used:   482206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)