Query= MSMg01no079_n09.b1 MSMg01no079_n09.b1 CHROMAT_FILE:
MSMg01no079_n09.b1 PHD_FILE: MSMg01no079_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:34 2005
(657 letters)
>mm_chr5_58454514_58455570
Length = 1057
Score = 1237 bits (640), Expect = 0.0
Identities = 649/652 (99%), Gaps = 1/652 (0%)
Strand = Plus / Minus
Query: 5 gaattctattaaacaacaagtcagtcttattattgaatttagctagatcaatggtgctaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gaattctattaaacaaaaagtcagtcttattattgaatttagctagatcaatggtgctaa 696
Query: 65 aaaacatcatccagccagtttgaaagggattcattgtcaaatgtccatttaaataactgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 aaaacatcatccagccagtttgaaagggattcattgtcaaatgtccatttaaataactgg 636
Query: 125 ctatactgtttaattaaataactctccaaaattgcactgcgaaatgagtatattagtcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ctatactgtttaattaaataactctccaaaattgcactgcgaaatgagtatattagtcat 576
Query: 185 tcaaatcctcaacatttgagaacattcggggttgaaactgatggtggatttaaaagactc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tcaaatcctcaacatttgagaacattcggggttgaaactgatggtggatttaaaagactc 516
Query: 245 attaccacacatggatatttcacatcttttttagaagagactgtgtattaatttagcctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 attaccacacatggatatttcacatcttttttagaagagactgtgtattaatttagcctt 456
Query: 305 cagtgggaaagaagaacactctagtatcaacctcctctcccttttgatgtttagcaagac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cagtgggaaagaagaacactctagtatcaacctcctctcccttttgatgtttagcaagac 396
Query: 365 tgcattactcatgtacagtgtgaatacaaaagctgttatctttgtgttaacctagaaatg 424
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 395 tgcattactcatgtacagtgtgaatacaaaagctattatctttgtgttaacctagaaatg 336
Query: 425 caatctaaaaattgggcctgcgatagatttttacacagcattttagttctgaagaaaatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 caatctaaaaattgggcctgcgatagatttttacacagcattttagttctgaagaaaatg 276
Query: 485 aaatatcataaattcagtttagcatctatacggtaaagaaaaaccaactgaaaatgaaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaatatcataaattcagtttagcatctatacggtaaagaaaaaccaactgaaaatgaaac 216
Query: 545 tgaaatttgacattaatttatattatatatttgcaacttactatttatattagaanaaaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 215 tgaaatttgacattaatttatattatatatttgcaacttactatttatattagaa-aaaa 157
Query: 605 tgtaatgttacatggattgaaaatggtgatgaaattagcttttgctgaatgt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tgtaatgttacatggattgaaaatggtgatgaaattagcttttgctgaatgt 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_n09.g1 MSMg01no079_n09.g1 CHROMAT_FILE:
MSMg01no079_n09.g1 PHD_FILE: MSMg01no079_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:34 2005
(632 letters)
>mm_chr5_58316980_58318011
Length = 1032
Score = 1210 bits (626), Expect = 0.0
Identities = 629/630 (99%), Gaps = 1/630 (0%)
Strand = Plus / Plus
Query: 1 ttcttaggtcttggattactagaaagcttagtgagtggcacatacctgtattcccaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttcttaggtcttggattactagaaagcttagtgagtggcacatacctgtattcccaggct 259
Query: 61 tgggacatgttcaaagacaggtt-aattttgtgtgacacaacttttgtgaactataaagc 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgggacatgttcaaagacaggtttaattttgtgtgacacaacttttgtgaactataaagc 319
Query: 120 aagtttaggcaagtcaggtctatatattgataactggtctcaacaaaccaaccaacaaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagtttaggcaagtcaggtctatatattgataactggtctcaacaaaccaaccaacaaac 379
Query: 180 caatctcctcaaaaataaaatgtataacaaaagaatgtatagcatattctttcagccttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caatctcctcaaaaataaaatgtataacaaaagaatgtatagcatattctttcagccttt 439
Query: 240 tgcacaaagcaatctcttattttatcatcatgaaccaatcaggccattgcgttgacatga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgcacaaagcaatctcttattttatcatcatgaaccaatcaggccattgcgttgacatga 499
Query: 300 gtcaagtattcatgtcactaagtcagaaagagactaatgaatgtgtttttctttttgcta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtcaagtattcatgtcactaagtcagaaagagactaatgaatgtgtttttctttttgcta 559
Query: 360 attccatttactaatgatttcagaataacaggttaatagaaattacctcaaatagggaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attccatttactaatgatttcagaataacaggttaatagaaattacctcaaatagggaaa 619
Query: 420 gaatgaaggtcaacttaatattcatgtctttaatttgatggttcaatttcattagtagtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaatgaaggtcaacttaatattcatgtctttaatttgatggttcaatttcattagtagtt 679
Query: 480 tatacatatgtacatacagtctgacatagtcatgaaaacacaaatggagggtagtgtggt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tatacatatgtacatacagtctgacatagtcatgaaaacacaaatggagggtagtgtggt 739
Query: 540 gagattgtttaacaatatataaggacccttgaaattaacacattaagaatcagtttctga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gagattgtttaacaatatataaggacccttgaaattaacacattaagaatcagtttctga 799
Query: 600 agttggtccctggactaaaaaattcccttt 629
||||||||||||||||||||||||||||||
Sbjct: 800 agttggtccctggactaaaaaattcccttt 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
