Query= MSMg01no081_n03.b1 MSMg01no081_n03.b1 CHROMAT_FILE:
MSMg01no081_n03.b1 PHD_FILE: MSMg01no081_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:09 2005
(326 letters)
>mm_chr5_92509168_92509893
Length = 726
Score = 478 bits (247), Expect = e-139
Identities = 280/291 (96%), Gaps = 5/291 (1%)
Strand = Plus / Minus
Query: 4 ggaattctaagtatca-ttctcatttttctgtaaatgaagttaacatcttccttattcaa 62
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggaattctaagtatcagtt-tcatttttctgtaaatgaagttaacatcttccttattcaa 258
Query: 63 ggaggtaaaagaaacacaggatactcgttaaactttaaaatgtaatgttagggtgggcat 122
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 257 ggaggtaaaagaaacagaggatactcattaaactttaaaatgtaatgttagggtgggcat 198
Query: 123 ggttgcatatgcctgtaatctcagaggcagtggagggcaggctggtcctatagagggaat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ggttgcatatgcctgtaatctcagaggcagtggagggcaggctggtcctatagagggaat 138
Query: 183 tccagaacagccagggctacacagagagaccttgtttcagaaggggcagcacataattaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tccagaacagccagggctacacagagagaccttgtttcagaaggggcagcacataattaa 78
Query: 243 tttttctttctttctttctttc-tttctttctttctttctttctttctttc 292
|||||||||||||||||||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct: 77 tttttctttctttctttctttccttttttttttttttttttt-ttt-tttc 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_n03.g1 MSMg01no081_n03.g1 CHROMAT_FILE:
MSMg01no081_n03.g1 PHD_FILE: MSMg01no081_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:09 2005
(150 letters)
>mm_chr5_92371318_92371868
Length = 551
Score = 269 bits (139), Expect = 6e-77
Identities = 148/151 (98%), Gaps = 1/151 (0%)
Strand = Plus / Plus
Query: 1 acatcagtttggtactattcttcctacattctgctttggccgctcca-aaacatgtactg 59
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 acatcagtttggtactattcttcctacattctgctttggccgctccacaaacatgtactg 260
Query: 60 gtcaaacaagagccattctgtcagttacgaatcctattttgcttgttttagttgggctct 119
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gccaaacaagagccattctgtcagttacaaatcctattttgcttgttttagttgggctct 320
Query: 120 agttgtctgcttcattgttttttgttttgct 150
|||||||||||||||||||||||||||||||
Sbjct: 321 agttgtctgcttcattgttttttgttttgct 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 551
Length adjustment: 8
Effective length of query: 142
Effective length of database: 543
Effective search space: 77106
Effective search space used: 77106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
