MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-083B13
Chromosome	5 (Build37)
Map Location	12,093,638 - 12,094,140
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC667916, LOC100041472, EG545728, LOC100042819, LOC667942, LOC667948, EG667949, Speer1-ps1, EG667956, LOC667961, EG667967, LOC100042858, LOC667974, EG667986, EG623898, EG668001, LOC668008, EG668011, LOC668017, EG668021, LOC623998, EG668043, LOC545732, LOC384144
Downstream gene	LOC100041626, EG668059, Sema3d, LOC668015, LOC100042917, LOC668069, LOC433845, LOC625989
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC667916 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 29 ESTs, 2 Proteins pseudo : _no_value

name	LOC100041472 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins pseudo : _no_value

name	EG545728 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545728 MGI:3644254
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 2 Proteins

name	LOC100042819 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042819
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC667942 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs pseudo : _no_value

name	LOC667948 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667948
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 31 ESTs, 2 Proteins pseudo : _no_value

name	EG667949 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667949 MGI:3646065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Speer1-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70896 MGI:1918146
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	EG667956 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667956 MGI:3643082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	LOC667961 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667961
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 33 ESTs, 1 Protein pseudo : _no_value

name	EG667967 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667967 MGI:3646244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs pseudo : _no_value

name	LOC100042858 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC667974 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667974
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 2 Proteins pseudo : _no_value

name	EG667986 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667986 MGI:3646462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST pseudo : _no_value

name	EG623898 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623898 MGI:3644247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668001 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668001 MGI:3643680
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins pseudo : _no_value

name	LOC668008 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 34 ESTs, 2 Proteins pseudo : _no_value

name	EG668011 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668011 MGI:3643161
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC668017 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 34 ESTs, 2 Proteins pseudo : _no_value

name	EG668021 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668021 MGI:3646328
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins pseudo : _no_value

name	LOC623998 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623998
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 33 ESTs, 2 Proteins pseudo : _no_value

name	EG668043 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668043 MGI:3645707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs pseudo : _no_value

name	LOC545732 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545732
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 33 ESTs, 1 Protein

name	LOC384144 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins pseudo : _no_value

name	LOC100041626 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	EG668059 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668059 MGI:3648962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins pseudo : _no_value

name	Sema3d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108151 MGI:1860118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668015 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668015
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 1030 ESTs, 3 Proteins pseudo : _no_value

name	LOC100042917 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 1 Protein

name	LOC668069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC433845 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433845
definition	note : glyceraldehyde-3-phosphate dehydrogenase pseudogene pseudo : _no_value

name	LOC625989 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 47 ESTs pseudo : _no_value

name	LOC100042819 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253534 GeneID:100042819
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042819 transcript_id : XM_001479326.1

name	LOC100042858 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253536 GeneID:100042858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical protein LOC100042858 transcript_id : XM_001479342.1

name	EG623898 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373516 GeneID:623898 MGI:3644247
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG623898 transcript_id : NM_001037919.2

name	Sema3d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359860 GeneID:108151 MGI:1860118
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D transcript_id : NM_028882.3

name	LOC100042917 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253540 GeneID:100042917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 1 Protein product : hypothetical protein LOC100042917 transcript_id : XM_001479388.1

name	LOC100042819 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253535 GeneID:100042819
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479376.1

name	LOC100042858 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253537 GeneID:100042858
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479392.1

name	EG623898 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776567 GeneID:623898 MGI:3644247
definition	codon_start : 1 product : hypothetical protein LOC623898 protein_id : NP_001033008.1

name	Sema3d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560069 GeneID:108151 MGI:1860118
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : semaphorin 3D protein_id : NP_083158.2

name	LOC100042917 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253541 GeneID:100042917
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479438.1

name	EG667949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667949
definition	number : 1 pseudo : _no_value

name	EG667949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667949
definition	number : 2 pseudo : _no_value

name	EG668011 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668011
definition	number : 1 pseudo : _no_value

name	EG668011 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668011
definition	number : 2 pseudo : _no_value

name	LOC100041626 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041626
definition	number : 1 pseudo : _no_value

name	LOC668069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668069
definition	number : 3 pseudo : _no_value

name	LOC668069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668069
definition	number : 2 pseudo : _no_value

name	LOC668069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668069
definition	number : 1 pseudo : _no_value

name	LOC667916 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253516 GeneID:667916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 29 ESTs, 2 Proteins product : similar to EG545728 protein pseudo : _no_value transcript_id : XR_032733.1

name	LOC100041472 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253517 GeneID:100041472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins product : similar to Anapc5 protein pseudo : _no_value transcript_id : XR_032742.1

name	EG545728 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94374200 GeneID:545728 MGI:3644254
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 2 Proteins product : predicted gene, EG545728 transcript_id : XR_002345.1

name	LOC667942 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253533 GeneID:667942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : similar to anaphase-promoting complex subunit 5 pseudo : _no_value transcript_id : XR_034150.1

name	LOC667948 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:94374203 GeneID:667948
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 31 ESTs, 2 Proteins product : similar to EG545728 protein pseudo : _no_value transcript_id : XR_001618.1

name	Speer1-ps1 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:144226232 GeneID:70896 MGI:1918146
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated glutamate (E)-rich protein 1, pseudogene 1 pseudo : _no_value transcript_id : NR_001586.2

name	EG667956 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94374207 GeneID:667956 MGI:3643082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : predicted gene, EG667956 pseudo : _no_value transcript_id : XR_002106.1

name	LOC667961 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253518 GeneID:667961
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 33 ESTs, 1 Protein product : similar to EG545728 protein pseudo : _no_value transcript_id : XR_032792.1

name	EG667967 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94374210 GeneID:667967 MGI:3646244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : predicted gene, EG667967 pseudo : _no_value transcript_id : XR_002110.1

name	LOC667974 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253519 GeneID:667974
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 2 Proteins product : similar to EG545728 protein pseudo : _no_value transcript_id : XR_032800.1

name	EG667986 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149253538 GeneID:667986 MGI:3646462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG667986 pseudo : _no_value transcript_id : XR_002114.2

name	EG668001 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149253520 GeneID:668001 MGI:3643680
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins product : predicted gene, EG668001 pseudo : _no_value transcript_id : XR_035678.1

name	LOC668008 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253521 GeneID:668008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 34 ESTs, 2 Proteins product : similar to EG545728 protein pseudo : _no_value transcript_id : XR_032820.1

name	LOC668017 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253522 GeneID:668017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 34 ESTs, 2 Proteins product : similar to EG545728 protein pseudo : _no_value transcript_id : XR_032841.1

name	EG668021 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94374222 GeneID:668021 MGI:3646328
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins product : predicted gene, EG668021 pseudo : _no_value transcript_id : XR_002119.1

name	LOC623998 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253523 GeneID:623998
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 33 ESTs, 2 Proteins product : similar to EG545728 protein pseudo : _no_value transcript_id : XR_032857.1

name	EG668043 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94374225 GeneID:668043 MGI:3645707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : predicted gene, EG668043 pseudo : _no_value transcript_id : XR_002124.1

name	LOC545732 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:94374228 GeneID:545732
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 33 ESTs, 1 Protein product : Speer1-like transcript_id : XR_001623.1

name	LOC384144 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253524 GeneID:384144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins product : similar to anaphase-promoting complex subunit 5 pseudo : _no_value transcript_id : XR_032881.1

name	EG668059 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94374229 GeneID:668059 MGI:3648962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins product : predicted gene, EG668059 pseudo : _no_value transcript_id : XR_002130.1

name	LOC668015 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253539 GeneID:668015
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 1030 ESTs, 3 Proteins product : similar to ribosomal protein S6 pseudo : _no_value transcript_id : XR_034178.1

name	LOC625989 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253542 GeneID:625989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 47 ESTs product : hypothetical LOC625989 pseudo : _no_value transcript_id : XR_034188.1

clone name	MSMg01-413D22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-295P21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-512G13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-334F17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-302O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146F19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-083B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-083B13.T7 (MSMg01no083_b13.b1)	MSMg01-083B13.TJ (MSMg01no083_b13.g1)
ACC	AG303310	AG303311
length	734	704
length of high quality (start - end)	240 (41 - 280)	637 (68 - 704)
definition	CHROMAT_FILE: MSMg01no083_b13.b1 PHD_FILE: MSMg01no083_b13.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:32:44 2005	CHROMAT_FILE: MSMg01no083_b13.g1 PHD_FILE: MSMg01no083_b13.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:32:44 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC CTAATCTTCTCCAAGACTTTTATCATGAATGGGTGTTGGGTTTTGTCAAA TGCTTTCTCAGCATCTAAAGAGATGATCATGTGGTTTTTTTTTCCCTCTG AGTTTGTTTACATAGTGGATTATGTTGATAAATTTCTGTGTATTAAACCA TTCCTGCTTCCCTGGTATGAAGACTACTTGATCATGATGGGTGATCATTT TGATGTATTTTTGAATTTGGTTTGTGAGAATTTTTCTCACACCCCCTACC TTAATTCTTTTTTTTTTTTTTCTCACCGTTATTTTTTTTTTTTTCTGTTT TTTTTTTTCTCTTCCCTTTCGCTCTTTTTCCCCTCTCTTTTGCCCCTCTC TTTTTGCCCCCCCCCTTGTGTTTTTGTTTCCTTTGTTTACTTCTTTTTTT CTCCTTTTTTCTTTTCTATCTGTCTTCTGCCCTTTTTCTCTTTTTTCTTT TTATTTTTTCCCTTCTTTTTTCTTTTATTTTTCTACCTGTCTACATCCCT ATTTTATCTTTCTTTTTTTTTTTTTTTTTCTTGTCTTCTATCCTCCTTTC TCTTTCTCTTTCTTCTTTTCTCCTTACTTTATTTCATTTTTGTTTTCGTC TCTGTTTTTCTTTTTTTGTTCTTTTTGTTGTGGACTTTCTCTTTATTCCT TCCCCCTCTCATCCCCCTTTTCTATTTCACTCTC	ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXCATGTGTGGAAATCATCTGTCTGTTATTCCCTC AAGGCCTTTAAAACTAAACCTCAGTCCACCATGAGCTACTGCTGATGCTT AGGTTGCAAACTTTTGTTCAGAGGAACATTATCCTCCCTGTTGTCCTCAT TGAAATAACGACTGAAAGTAATGAAGAACAAATAAGTAATATCAATATCA ATATAAAGTACTAGCAGAGAAGGGACTTCTTTATGTTTTTAAAATTAGAA TATTTATTTTTTTCTTTATGTACTTTTAAACTCTGTATAAGATGGGAATT GTTAGATTTATAATTAGAATCTGACCTTAAAGCTGCAAGGACTTAATTAA GACATCTGGACTTAATTAAGACACATGTGTTTTTAGCTGGAGAGACTGGA CCTAGAACAGGACAGCTTAACAGTATGTCTCAGGGTTGTGCCCACGGGGA AAAGAAGACAATATTTTTATTACTACACCACATTGAATATATTAACAGCC ACTTGTAGCCTTTGGGGTAAAGTATATCTCTTCTGTTGCACAAGGTTATG GTAGAACCAATAACATGCCTGCCTTCCTGCAACAGATGTCACAGTATTTA TTCTAGGTCAGCCTTACCATATTGTCTATTGCTTTAATGAGTGTCACTCT CCCA
quality values	Open. Hide. 12 12 15 23 23 30 23 23 19 17 14 17 9 8 8 15 19 33 33 47 29 29 27 18 18 8 8 8 8 10 10 12 14 19 19 23 25 24 24 24 29 34 47 47 36 36 36 36 33 33 50 50 41 39 24 15 8 9 9 8 10 16 16 24 30 41 50 50 53 53 53 35 35 35 35 37 37 37 40 37 37 37 42 50 50 50 50 50 50 50 68 51 42 42 42 42 42 51 51 50 68 68 68 68 68 68 51 50 50 50 50 50 50 48 50 57 47 48 57 57 51 51 50 51 51 50 50 50 50 50 48 50 50 50 50 50 68 68 68 59 59 57 57 57 57 57 57 57 57 57 54 57 57 50 50 50 51 50 57 57 57 50 50 50 52 52 47 50 50 57 50 50 57 57 57 50 50 50 50 68 68 57 50 50 50 50 50 50 50 47 47 52 57 57 57 59 59 59 54 54 54 57 57 57 57 54 57 57 57 57 54 50 44 43 42 46 47 57 57 57 48 48 48 57 57 68 57 59 57 57 57 57 57 57 48 50 47 47 47 42 44 37 39 42 46 54 54 54 57 57 68 68 54 54 54 54 57 57 57 57 59 57 42 39 39 48 40 34 30 26 42 37 23 30 18 18 12 15 15 24 19 16 15 15 9 9 10 10 10 13 13 15 19 10 10 6 6 6 6 8 8 8 8 8 10 8 8 10 15 11 11 16 14 11 8 10 8 16 8 8 8 8 6 6 8 8 8 8 8 9 17 12 19 21 28 24 19 16 14 14 16 13 15 13 14 8 8 8 13 13 18 23 19 19 15 13 15 10 11 9 11 11 11 11 11 17 13 12 8 8 6 8 8 8 8 13 12 12 8 8 8 8 8 8 8 8 8 8 8 10 8 9 9 9 10 9 8 8 6 6 10 12 6 6 6 6 8 10 21 25 29 37 18 18 12 12 6 6 6 6 8 10 10 9 8 8 8 15 9 9 10 10 8 8 8 8 8 8 9 11 11 11 9 16 10 9 10 8 8 8 10 8 8 8 8 8 8 9 9 9 10 10 10 8 10 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 10 10 11 13 11 8 8 8 8 8 12 13 14 11 11 11 11 20 23 19 10 10 8 12 10 9 10 12 12 11 10 10 10 8 10 8 9 9 10 11 11 8 10 8 9 10 10 15 13 10 6 6 6 6 8 8 8 8 8 8 8 8 8 8 9 9 9 9 15 21 22 19 14 8 8 8 8 8 10 10 8 11 11 11 10 10 11 11 11 17 13 11 11 10 15 16 12 8 8 8 8 8 8 8 8 8 11 11 8 8 8 8 8 8 10 12 15 12 12 11 13 11 11 21 15 15 19 16 18 10 8 8 8 10 10 13 10 11 11 11 9 13 11 11 8 10 10 8 8 8 8 10 10 8 8 8 8 10 8 8 8 10 10 10 8 8 8 8 8 8 8 8 10 10 13 16 16 9 9 8 8 10 10 10 12 8 8 8 8 8 8 22 15 15 9 9 10 10 8 8 8 6 6 8 8 10 8 10 10 11 8 10 12 9 9 9 9 9 10 10 10 10 8 8 8 10 11 11 10 10 8 8 8 9 9 10 11 8 8 7 7 8 8 10 10 10 10 10 9 8 8 8 8	Open. Hide. 6 8 8 15 10 8 8 8 13 23 29 30 33 37 39 33 33 33 33 33 42 27 23 12 15 19 18 14 12 11 11 11 11 12 19 19 22 24 28 28 21 21 10 11 12 26 21 50 36 35 26 17 17 11 13 14 16 27 27 57 48 42 42 42 50 50 50 42 42 42 47 68 68 68 68 68 50 50 50 50 50 50 50 50 51 50 50 50 51 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 50 50 50 50 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 51 51 51 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 68 68 68 68 62 68 68 68 68 62 62 68 68 68 68 68 68 57 59 59 68 68 68 68 68 68 68 57 57 57 59 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 52 57 57 57 57 57 57 57 57 57 57 59 57 54 57 57 57 57 68 59 59 68 68 68 68 68 68 57 57 57 57 57 59 59 68 68 68 68 68 68 57 57 48 50 50 57 59 50 50 43 43 48 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 54 54 48 48 48 48 48 41 47 48 48 57 57 59 46 46 36 39 39 42 43 43 48 57 59 59 59 59 59 59 48 48 43 57 43 48 48 57 57 48 48 48 48 48 50 50 50 47 41 37 37 37 31 31 37 39 39 41 36 39 39 39 39 39 39 43 43 37 37 43 44 43 41 41 41 42 48 43 59 43 48 48 48 48 48 59 59 59 59 59 59 43 43 43 37 37 43 43 43 43 43 43 43 59 59 48 47 47 41 36 28 28 28 30 30 27 29 32 37 37 29 32 20 18 20 30 28 34 43 41 36 36 40 40 39 37 34 34 31 40 40 34 34 28 28 34 36 37 36 36 28 28 30 39 39 37 37 37 37 39 39 37 37 32 24 19 20 20 23 32 30 32 39 39 36 36 36 39 41 48 39 39 30 30 28 37 32 43 43 33 33 29 24 22 22 30 28 23 22 11 10 9 10 10 15 20 37 39 39 23 23 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no083_b13.g1 MSMg01no083_b13.g1 CHROMAT_FILE:
MSMg01no083_b13.g1 PHD_FILE: MSMg01no083_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:44 2005
         (637 letters)



>mm_chr5_12093104_12094140
          Length = 1037

 Score =  864 bits (447), Expect = 0.0
 Identities = 492/513 (95%), Gaps = 13/513 (2%)
 Strand = Plus / Minus

                                                                        
Query: 128  cctcattgaaataacgactgaaagtaatgaagaacaaataagtaatatcaatatcaatat 187
            |||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1037 cctcattgaaatgatgactgaaagtaatgaagaacaaataagtaatatcaatataaatat 978

                                                                        
Query: 188  aaagtactagcagagaagggacttctttatgtttttaaaattagaatatttatttttttc 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977  aaagtactagcagagaagggacttctttatgtttttaaaattagaatatttatttttttc 918

                                                                        
Query: 248  tttatgtacttttaaactctgtataagatgggaattgttagatttataattagaatctga 307
            ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 917  tttatgtactttttaactctgtataagatgggaattgttagatttatgattagaatctgg 858

                                                                        
Query: 308  ccttaaagctgcaag--gacttaattaagacatctggacttaattaagacacatgtgttt 365
            |||||||||||||||  |||         |||||||||||||||||||||||||||||||
Sbjct: 857  ccttaaagctgcaaggagac---------acatctggacttaattaagacacatgtgttt 807

                                                                        
Query: 366  ttagctggagagactggacctagaacaggacagcttaacagtatgtctcagggttgtgcc 425
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 806  ttagctggagagactggacctagaacaggacaccttaacagtatgtctcagggttgtgcc 747

                                                                        
Query: 426  cacggggaaaagaagacaatatttttattactacaccacattgaatatattaacagccac 485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746  cacggggaaaagaagacaatatttttattactacaccacattgaatatattaacagccac 687

                                                                        
Query: 486  ttgtagcctttggggtaaag-tatatctcttctgttgcacaaggttatggtagaaccaat 544
            |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 686  ttgtagcctttggggt-aagttatatctcttctgttgcacaaggttatggtagaaccaat 628

                                                                        
Query: 545  aacatgcctgccttcctgcaacagatgtcacagtatttattctaggtcagccttaccata 604
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627  aacatgtctgccttcctgcaacagatgtcacagtatttattctaggtcagccttaccata 568

                                             
Query: 605  ttgtctattgctttaatgagtgtcactctccca 637
            |||||||||||||||||||||||||||||||||
Sbjct: 567  ttgtctattgctttaatgagtgtcactctccca 535


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information