Query= MSMg01no083_c24.b1 MSMg01no083_c24.b1 CHROMAT_FILE:
MSMg01no083_c24.b1 PHD_FILE: MSMg01no083_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:51 2005
(494 letters)
>mm_chr5_5617760_5618653
Length = 894
Score = 899 bits (465), Expect = 0.0
Identities = 477/481 (99%)
Strand = Plus / Minus
Query: 1 taaaaaacccctcataattgttcatagactactgttaagtaagtaggaaaatagtatcat 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 481 taaaaaacccctcataattgttcatagactagtgttaagtaagtaggaaaatagtatcat 422
Query: 61 ataggacagggttttacattctcataaactgaaatatgcatcagccaggattaatgattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ataggacagggttttacattctcataaactgaaatatgcatcagccaggattaatgattg 362
Query: 121 tattgaccatttttgccattggtcattttatattttttcatgttttaatttttactgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tattgaccatttttgccattggtcattttatattttttcatgttttaatttttactgaaa 302
Query: 181 tgctaggttcaatggaattataaaatcttaaactgtctaattaaaaatggcttgtgacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgctaggttcaatggaattataaaatcttaaactgtctaattaaaaatggcttgtgacct 242
Query: 241 gagtgacagtcattgatacagtgtatcaattctttttttgtttgtttattagatattttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagtgacagtcattgatacagtgtatcaattctttttttgtttgtttattagatattttc 182
Query: 301 ttcatttacatttcaaatgctatcatttttctatcccatatgtcgcagtgcatcaattct 360
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 181 ttcatttacatttcaaatgctatcatttttctatcccatacgtcgcagtgtatcaattct 122
Query: 361 taaatttgtacataagaaacaattagcttgcagtgccctcttacatgcatgcacctctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaatttgtacataagaaacaattagcttgcagtgccctcttacatgcatgcacctctga 62
Query: 421 gggctagcggtgcaggcgagtgggaggcttaggactggcatgcacaaggtcccagctcga 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 gggctagcggtgcaggcgagtgggaggcttaggactggcatgcacaagggcccagctcga 2
Query: 481 a 481
|
Sbjct: 1 a 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_c24.g1 MSMg01no083_c24.g1 CHROMAT_FILE:
MSMg01no083_c24.g1 PHD_FILE: MSMg01no083_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:51 2005
(171 letters)
>mm_chr5_5459444_5460014
Length = 571
Score = 292 bits (151), Expect = 7e-84
Identities = 166/171 (97%)
Strand = Plus / Plus
Query: 1 atggcttgacttggggagctcaagatgagcgcacagtatgccttggtttgttagagcagc 60
||||||||||||| |||||||||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 201 atggcttgacttgaggagctcaagatgagctcacagtatgcctcggtttgttacagcagc 260
Query: 61 actaaccactaccttctctgaacaggagtttcatcctctgttatcttgatttagcttccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actaaccactaccttctctgaacaggagtttcatcctctgttatcttgatttagcttccg 320
Query: 121 tggtgattagtgagttctggggagttggttttaatgattatgtagcttact 171
|||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tggtgattagtgagttctggggagttggttttaatgattacgtagcttact 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
