Query= MSMg01no083_j12.b1 MSMg01no083_j12.b1 CHROMAT_FILE:
MSMg01no083_j12.b1 PHD_FILE: MSMg01no083_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:22 2005
(259 letters)
>mm_chr5_81623661_81624315
Length = 655
Score = 447 bits (231), Expect = e-130
Identities = 246/253 (97%), Gaps = 4/253 (1%)
Strand = Plus / Minus
Query: 6 gaattctcacagaatttctccacattccatctaggaagcaaaccgagacagagacacaca 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gaattctcacagaatttatccacattccatctaggaagcaaaccgagacagagacacaca 395
Query: 66 aggagaagacacacctatatggagatgtacattttatatacttataaactacacggtaac 125
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 394 aggagaagacacacctatatggagatgtacattttatatacttataaactacac----ac 339
Query: 126 tgcctattttctataggacatgcacacattttatacttagctaaaatccccactgtgtga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgcctattttctataggacatgcacacattttatacttagctaaaatccccactgtgtga 279
Query: 186 caaacatttcatactgtcctttaaacttttaaaatagtcatctgatatttgtctggataa 245
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 caaacatttcatattgtcctttaaacttttaaaatagtcatctgatatttgtctggatac 219
Query: 246 ttttatcttacaa 258
|||||||||||||
Sbjct: 218 ttttatcttacaa 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 655
Length adjustment: 9
Effective length of query: 250
Effective length of database: 646
Effective search space: 161500
Effective search space used: 161500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no083_j12.g1 MSMg01no083_j12.g1 CHROMAT_FILE:
MSMg01no083_j12.g1 PHD_FILE: MSMg01no083_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:22 2005
(251 letters)
>mm_chr5_81493917_81494567
Length = 651
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Plus
Query: 1 agaaatccgcctacctctgcctcccaagtgctgggattaaatgtgtgcaccaccacaccc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaatccgcctacctctgcctcccgagtgctgggattaaatgtgtgcaccaccacaccc 260
Query: 61 agctatttcaccattcttatattctgatttatatttaaaacaaaaggacacacttgatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctatttcaccattcttatattctgatttatatttaaaacaaaaggacacacttgatat 320
Query: 121 tctaaacagtgactaatgacctttccggaagcttggcctcaagaataacatctgaaacgt 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 tctaaacagtgactaatgacctttccagaagcttggcctcaagaataacatctgaaacgt 380
Query: 181 cctctaaaccaaggtctggttaagtcaccaaggaatattccagtgaaacaattgtataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctctaaaccaaggtctggttaagtcaccaaggaatattccagtgaaacaattgtataaa 440
Query: 241 ttttcatga 249
|||||||||
Sbjct: 441 ttttcatga 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
