Query= MSMg01no083_o08.b1 MSMg01no083_o08.b1 CHROMAT_FILE:
MSMg01no083_o08.b1 PHD_FILE: MSMg01no083_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:46 2005
(639 letters)
>mm_chr5_144423609_144424647
Length = 1039
Score = 1156 bits (598), Expect = 0.0
Identities = 625/634 (98%), Gaps = 2/634 (0%)
Strand = Plus / Plus
Query: 7 gaattcatatcatcaggtttggtgccacatgcttttatttgctgagccatcttactggcc 66
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcagatcatcaggtttggtgccacatgcttttatttgctgagccatcttactggcc 266
Query: 67 ttccaggggctacttttcgtgccatctaatgtctcctataggttgccctttcacactgta 126
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 267 ttccaggggctacttttcgtgccatctaatgtctcctataagttgccctttcacactgta 326
Query: 127 acacatgcataccctcccatatatacaagataaaatatagcacggccccagactcacttt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acacatgcataccctcccatatatacaagataaaatatagcacggccccagactcacttt 386
Query: 187 gtagaccaggctggcctcaaactcacactatctcttgcctctgctctaccgagtgctgag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtagaccaggctggcctcaaactcacactatctcttgcctctgctctaccgagtgctgag 446
Query: 247 attaaaggtgtccacaccgtactacgtgaggcaagccatggtggagtgtcatcacagtta 306
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 447 attaaaggtgtccacaccgtactacgtgaggcaagccagggtggagtgtcatcacagtta 506
Query: 307 ggtaggcatagcacctcaccaacccacctgttctctctaaggctcgagattcctttctgc 366
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ggtaggcgtagcacctcaccaacccacctgttctctctaaggctcgagattcctttctgc 566
Query: 367 actgtggccttccactggccttcaaggggagctctggccctggcaaatgcagcttgcttt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 actgtggccttccactggccttcaaggggagctctggccctggcaaatgcagcttgcttt 626
Query: 427 tcctttgttcaagaatgtttcagtttccccttagttcccaaaggataattttgtcagatg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tcctttgttcaagaatgtttcagtttccccttagttcccaaaggataattttgtcagatg 686
Query: 487 tgctgtgttgacagctctttctttcttcacttgaaaaatgttgtgctatttcctcagacc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tgctgtgttgacagctctttctttcttcacttgaaaaatgttgtgctatttcctcagacc 746
Query: 547 gggaaggctctggtgagaacactgttgagtggatgtctgtctcctctaggtaagacattt 606
|||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 747 ggga-ggctttggtgagcacactgttgactggatgtctgtctcctctaggtaagacattt 805
Query: 607 ttctctctggctggaaacttttatctttt-cccc 639
||||||||||||||||||||||||||||| ||||
Sbjct: 806 ttctctctggctggaaacttttatctttttcccc 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_o08.g1 MSMg01no083_o08.g1 CHROMAT_FILE:
MSMg01no083_o08.g1 PHD_FILE: MSMg01no083_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:46 2005
(185 letters)
>mm_chr5_144525167_144525751
Length = 585
Score = 346 bits (179), Expect = e-100
Identities = 179/179 (100%)
Strand = Plus / Minus
Query: 3 atagtctccgagtttctttcatctatttcttgaggtgagttaagacttttggcttatcat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagtctccgagtttctttcatctatttcttgaggtgagttaagacttttggcttatcat 322
Query: 63 ctgtgtgtcctcatgccactttcctagacacctgtacttgctaaggatgggattgaaggt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtgtgtcctcatgccactttcctagacacctgtacttgctaaggatgggattgaaggt 262
Query: 123 gggatggtaatagccctgggaggggaccagaaggaaacttgggagatggttctactgcc 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggatggtaatagccctgggaggggaccagaaggaaacttgggagatggttctactgcc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 585
Length adjustment: 8
Effective length of query: 177
Effective length of database: 577
Effective search space: 102129
Effective search space used: 102129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
