Query= MSMg01no084_d06.b1 MSMg01no084_d06.b1 CHROMAT_FILE:
MSMg01no084_d06.b1 PHD_FILE: MSMg01no084_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:10 2005
(473 letters)
>mm_chr5_48777118_48777990
Length = 873
Score = 868 bits (449), Expect = 0.0
Identities = 464/469 (98%), Gaps = 2/469 (0%)
Strand = Plus / Minus
Query: 6 gaattctgaggaatacttcaa-atctattgtaaaaacaaaccccttttcgtttaaaattc 64
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gaattctgaggaatactt-aatatctattgtaaaaacaaaccccttttcgtttaaaattc 615
Query: 65 aatattagcaatatccaaagccagaaagactgagtgacaagcaaggagcctcctctctgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aatattagcaatatccaaagccagaaagactgagtgacaagcaaggagcctcctctctgg 555
Query: 125 gaccttgaattggccaactgcatcttctgcaggccggctccaaataacaaactacagctt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 554 gaccttgaattggccaactgcatcttctgcaggccggctccaaataacaaaccacagcgt 495
Query: 185 ctgaaatgcatctccactagaacttcccctgccaaacacaaaggcatccataagtgtcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctgaaatgcatctccactagaacttcccctgccaaacacaaaggcatccataagtgtcac 435
Query: 245 atgatcctcccatccctttttcctgattcattccctaaaaaggtctcctgaaggcagaca 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 434 atgatcctcccatccctttttcctgattcattccctagaaaggtctcctgaaggcagaca 375
Query: 305 accatctatctaggagaggtcagcttaaaaagctgtcatcattattcaccatctgttcac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 accatctatctaggagaggtcagcttaaaaagctgtcatcattattcaccatctgttcac 315
Query: 365 tggcatttatttcacaaaggaggtaagcacaattacttctgggattcagattctaagatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tggcatttatttcacaaaggaggtaagcacaattacttctgggattcagattctaagatg 255
Query: 425 accaagtacgtttacaaagtaattacttcatcagaagtagagtcaggac 473
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 accaagtacgtttacaaagtaattacttcatcagaagtagagtcaggac 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_d06.g1 MSMg01no084_d06.g1 CHROMAT_FILE:
MSMg01no084_d06.g1 PHD_FILE: MSMg01no084_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:10 2005
(242 letters)
>mm_chr5_48681002_48681646
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 242/245 (98%), Gaps = 3/245 (1%)
Strand = Plus / Plus
Query: 1 attatttttatcaggcttttatcagattaaacatttataccattttgtgagagaaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatttttatcaggcttttatcagattaaacatttataccattttgtgagagaaaaaaa 260
Query: 61 tcttaatatgattctcactcataatttgaaaataggatccagacccaatttgcaaaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttaatatgattctcactcataatttgaaaataggatccagacccaatttgcaaaagac 320
Query: 121 atacttaatatgcatttgtgtaacccccaggccttcattgtgaaattgcttttttttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atacttaatatgcatttgtgtaacccccaggccttcattgtgaaattgcttttttttttt 380
Query: 181 tt---gcaattcagtcatttttattagatgtaccaaattgtagaatcctcatacaaattc 237
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttgcaattcagtcatttttattagatgtaccaaattgtagaatcctcatacaaattc 440
Query: 238 actta 242
|||||
Sbjct: 441 actta 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 645
Length adjustment: 9
Effective length of query: 233
Effective length of database: 636
Effective search space: 148188
Effective search space used: 148188
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
