Query= MSMg01no086_b05.b1 MSMg01no086_b05.b1 CHROMAT_FILE:
MSMg01no086_b05.b1 PHD_FILE: MSMg01no086_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:40 2005
(402 letters)
>mm_chr5_79333903_79334708
Length = 806
Score = 700 bits (362), Expect = 0.0
Identities = 377/384 (98%), Gaps = 5/384 (1%)
Strand = Plus / Plus
Query: 24 gggaaaagga-acacatccctacccctgacaaagaagctatatgtcatggatacatgttg 82
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gggaaaaggacacacatccctacccctgacaaagaagctatatgtcatggatacatgttg 282
Query: 83 aaatatagaagatgaaatttatctagtgtagtgccactgggtatatcaaccacaatacag 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aaatatagaagatgaaatttatctagtgtagtgccactgggtatatcaaccacaatacag 342
Query: 143 cccaggagtagtggtcaacacaaaatgaacttcacattttagtggtttgttttgtttgtt 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cccaggagtagtggtcaacacaaaatgaacttcacattttagtggtttgttttgtttgtt 402
Query: 203 tgtgtgttgttgctggtgct----gtgtgtaattttaattctattttgttttaataattt 258
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 403 tgtgtgttgttgctggtgctatctgtgtgtaattttaattctattttgttttaataattt 462
Query: 259 ttgtctaattgggctttatttctttaatttattctgctttcatacaatgcatagtttcct 318
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ttgtctaattgggcttcatttctttaatttattctgctttcatacaatgcatagtttcct 522
Query: 319 tttaacccctctccttccagaccctttctccccacatcccgttttccctagatctactca 378
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 523 tttaacccctctccttccagaccctttctcctcacatcccgttttccctagatctactca 582
Query: 379 ctctttctctatatcctcttagaa 402
||||||||||||||||||||||||
Sbjct: 583 ctctttctctatatcctcttagaa 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 806
Length adjustment: 9
Effective length of query: 393
Effective length of database: 797
Effective search space: 313221
Effective search space used: 313221
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_b05.g1 MSMg01no086_b05.g1 CHROMAT_FILE:
MSMg01no086_b05.g1 PHD_FILE: MSMg01no086_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:40 2005
(452 letters)
>mm_chr5_79446510_79447361
Length = 852
Score = 812 bits (420), Expect = 0.0
Identities = 444/452 (98%)
Strand = Plus / Minus
Query: 1 ttctctcaagaatgtagcatgtcatctcaaaagattcgaaagtggggtataggccaatca 60
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 652 ttctctcaagaatgtagcacatcttctcaaaagattcgaaagtggggtataggccaatca 593
Query: 61 taagcacataaacagggataattctcatgatctttagagaatcactccatcctctcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 taagcacataaacagggataattctcatgatctttagagaatcactccatcctctcagaa 533
Query: 121 gattttctttgttaagaaaataaatgactttcttttgaacataaaactgggaaaacataa 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gattttctttgttaaaaaaataaatgactttcttttgaacataaaactgggaaaacataa 473
Query: 181 attataaggtaaggaataatttctgctaacaaacatcaatagaatcacatttttctgagt 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 472 attataaggtaaggaataatttctactaacaaacatcaatagaatcacatttttctgagt 413
Query: 241 gacactgaataccatgtaagttatcatatgtttttgaaacaaaatggatgtaagaaatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gacactgaataccatgtaagttatcatatgtttttgaaacaaaatggatgtaagaaatcc 353
Query: 301 agcgaagagttatcagaacattgcagtggaatcacagttttattaaataaaattcatata 360
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 352 ggcgaagagttatcagaacattgcagtggaatcatagttttattaaataaaattcatata 293
Query: 361 atgtaacttttttctgctttgattcctagggtaattgaatcttaaagtttttagcatgca 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 atgtaacttttttccgctttgattcctagggtaattgaatcttaaagtttttagcatgca 233
Query: 421 ctatgcagcatttctccatgtagttatctttg 452
||||||||||||||||||||||||||||||||
Sbjct: 232 ctatgcagcatttctccatgtagttatctttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
