Query= MSMg01no087_a20.b1 MSMg01no087_a20.b1 CHROMAT_FILE:
MSMg01no087_a20.b1 PHD_FILE: MSMg01no087_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:01 2005
(146 letters)
>mm_chr5_136325950_136326496
Length = 547
Score = 232 bits (120), Expect = 7e-66
Identities = 132/136 (97%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 12 ggaattctcttttctcg-atatataaggtctctgagggctagccagcacactcatttctg 70
||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 212 ggaattctcttttcttgtatagataaggtccctgagggctagccagcacactcatttctg 271
Query: 71 cattcaaatccatcttgagaatccaaagctggtactggtgctggcctccctcctctgtac 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cattcaaatccatcttgagaatccaaagctggtactggtgctggcctccctcctctgtac 331
Query: 131 aggaaaggatgaactg 146
||||||||||||||||
Sbjct: 332 aggaaaggatgaactg 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 547
Length adjustment: 8
Effective length of query: 138
Effective length of database: 539
Effective search space: 74382
Effective search space used: 74382
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_a20.g1 MSMg01no087_a20.g1 CHROMAT_FILE:
MSMg01no087_a20.g1 PHD_FILE: MSMg01no087_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:01 2005
(245 letters)
>mm_chr5_136441572_136442217
Length = 646
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%), Gaps = 1/246 (0%)
Strand = Plus / Minus
Query: 1 ttgcac-cacagcccccaacaaggaaggtgttaaccagtatggcacccgctacagccctc 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttgcacacacagcccccaacaaggaaggtgttaaccagtatggcacccgctacagccctc 387
Query: 60 caaaatggaaaaggtatgtcatacggtagtgtgaggcttggccaagcgggtgggctggct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 caaaatggaaaaggtatgtcatacggtagtgtgaggcttggccaagcgggtgggctggct 327
Query: 120 attttacccctgctgtggggttctggacctgcatgccaggttgctgtccctgggagacct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 attttacccctgctgtggggttctggacctgcatgccaggttgctgtccctgggagacct 267
Query: 180 ggtgcattgattaagtagatgaaaatggttccttccctgtaaaatgttacttgccccacc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggtgcattgattaagtagatgaaaatggttccttccctgtaaaatgttacttgccccacc 207
Query: 240 cctctc 245
| ||||
Sbjct: 206 catctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
