Query= MSMg01no087_c10.b1 MSMg01no087_c10.b1 CHROMAT_FILE:
MSMg01no087_c10.b1 PHD_FILE: MSMg01no087_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:10 2005
(321 letters)
>mm_chr5_46817689_46818409
Length = 721
Score = 549 bits (284), Expect = e-161
Identities = 308/316 (97%)
Strand = Plus / Minus
Query: 5 gaattcatgtttcctgatatgtcacctttctttccatgtcccaagttctcattttttaga 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gaattcatgtttcatgatatgtcacctttctttccatgtcccaagttctcattttttaga 461
Query: 65 cttcttattactcctcaaaatgatgtgtcactcactgtactcttttccaattgctcctag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cttcttattactcctcaaaatgatgtgtcactcactgtactcttttccaattgctcctag 401
Query: 125 acccaacctccttacatacagtcaggactcatatttcctctctgaaacttcaaactgttt 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 400 acccaacctccttacatacagtcaggactcatatttcctctgtgaaacttcaaactgttt 341
Query: 185 caccccagtataggaagagatcagattccctttgccacatatttttagcactctgcactt 244
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 340 caccccagtataggaagagatcagatttcctttgccacatatttttagcactctgcactt 281
Query: 245 ctgctctttaacatttaccacaaatgctattaaatgccagatttggagttgcctggctaa 304
||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| |||
Sbjct: 280 ctgctctttaacatttaccacaaatgcaattaaatgccagatttgtagttggctggttaa 221
Query: 305 acttaatagtgtctca 320
|||||| |||||||||
Sbjct: 220 acttaagagtgtctca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no087_c10.g1 MSMg01no087_c10.g1 CHROMAT_FILE:
MSMg01no087_c10.g1 PHD_FILE: MSMg01no087_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:10 2005
(533 letters)
>mm_chr5_46725765_46726696
Length = 932
Score = 938 bits (485), Expect = 0.0
Identities = 521/533 (97%), Gaps = 1/533 (0%)
Strand = Plus / Plus
Query: 1 actaaaatgcacatgagcaacagtaactaacaaaacatacatgttctgagacctggataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 actaaaatgcacatgagcaacagtaactaacaaaacatacatgttctgagatctggataa 260
Query: 61 ctatgtgtcactttacaactggcaacagaaaagtctccatgcagctggggggttttaaat 120
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ctaggtgtcactttacaactggcaacagaaaagtctccatgcagctgggggtttttaaat 320
Query: 121 gttcttgagcttgtgttctttgatctggaggtagagcacggccaagaggcacagcagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttcttgagcttgtgttctttgatctggaggtagagcacggccaagaggcacagcagctg 380
Query: 181 ggtcccacagccatgccatcttaccttgtccaggacatagggaatcagcctgtctctcca 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcccacagccatgccatcttaccttatccaggacatagggaatcagcctgtctctcca 440
Query: 241 ggccctcctcattgccctctggatagaacatcaaccaaagtacccagtaatagagttctt 300
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 441 ggccctcctcattgccctctggatagaacatcaaccaaagtacccagtgatatagttctt 500
Query: 301 tctacagctattgtcataggcctgtgttccaagttactctggaagctgaggcaggaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctacagctattgtcataggcctgtgttccaagttactctggaagctgaggcaggaggat 560
Query: 361 tgaaagctccaggtcagagtgggcaacttgtggtgccttgtctcaaaataaaagagtctg 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 tgaaagctccaggtcagagtgggcaacttgtggtgccttctctcaaaataaaagagtctg 620
Query: 421 tgcagcacgtgaaaaataaataaaggactctggcataacacaccatatgaattagatctc 480
|||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcagcacatgaaaaa-atataaaggactctggcataacacaccatatgaattagatctc 679
Query: 481 ataataacccatgaggtaggccttatcatttctagttgctaaatgaagttaac 533
|||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 680 ataataacccatgaggtaggtcatatcatttctagttgctaaatgaagttaac 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 932
Length adjustment: 10
Effective length of query: 523
Effective length of database: 922
Effective search space: 482206
Effective search space used: 482206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
