Query= MSMg01no088_h04.b1 MSMg01no088_h04.b1 CHROMAT_FILE:
MSMg01no088_h04.b1 PHD_FILE: MSMg01no088_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:55 2005
(446 letters)
>mm_chr5_32792659_32793504
Length = 846
Score = 828 bits (428), Expect = 0.0
Identities = 437/442 (98%), Gaps = 4/442 (0%)
Strand = Plus / Minus
Query: 5 gaattcagcccaccacactggtacttagctttcttttcagatggtttcaatatctttaaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaattcagcccaccatactggtacttagctttcttttcagatggtttcaatatctt---- 666
Query: 65 taaataaataaataaataatgtgtttattaacaatattattctttcaataaatgccatca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 taaataaataaataaataatgtgtttattaacaatattattctttcaataaatgccatca 606
Query: 125 actgtccagtgaaaataaaaataccttagcaattctgcacaaacatttcttagattgaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 actgtccagtgaaaataaaaataccttagcaattctgcacaaacatttcttagattgaag 546
Query: 185 tgtaagtttggccgagcagctcaataggaagtgcctggatttggtctgcagcaccgccct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgtaagtttggccgagcagctcaataggaagtgcctggatttggtctgcagcaccgccct 486
Query: 245 cccccaaggaagaacacttgcttaacatttgctttagattctagaaacacagcttagata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cccccaaggaagaacacttgcttaacatttgctttagattctagaaacacagcttagata 426
Query: 305 gacagcctcataactgaggcttaaatttaagttttaaagaatcttctctactagttcacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gacagcctcataactgaggcttaaatttaagttttaaagaatcttctctactagttcacc 366
Query: 365 ttattagagaggaaaaaatactggtctgagtcaaaaaccctaggttctcatctaaatctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttattagagaggaaaaaatactggtctgagtcaaaaaccctaggttctcatctaaatctg 306
Query: 425 acctttcccccaggttttttga 446
||||||||||||||||||||||
Sbjct: 305 acctttcccccaggttttttga 284
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_h04.g1 MSMg01no088_h04.g1 CHROMAT_FILE:
MSMg01no088_h04.g1 PHD_FILE: MSMg01no088_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:55 2005
(291 letters)
>mm_chr5_32689916_32690606
Length = 691
Score = 493 bits (255), Expect = e-144
Identities = 282/291 (96%)
Strand = Plus / Plus
Query: 1 aggaaaagttctaaacttactttacacaggaaccaaggtatgctcaggcagtggcatggt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 aggaaaagttctaaacttactttacacaggaaccaaggtatgctcaggtagtggcatggt 260
Query: 61 ggctgaattcagcagatggcactggtttgtcccccagggagggcctggcaatctgcttcc 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 ggctgaattcagcagatggcactggtttgtccctcagggagggcctggcaatctgcttcc 320
Query: 121 aaagctttagttttgctgccccgagtgagttttctgaggctactttagtgtgagttccta 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagctttagctttgctgccccgagtgagttttctgaggctactttagtgtgagttccta 380
Query: 181 aatgcccaccaaagtttcaaatctagtatgcatagtcagtccacttaggatgtagaggat 240
| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 381 agtgcccacaaaagtttcaaatctagtatgcatagtcagttaacttaggatgtagagaat 440
Query: 241 gcatagtcagtccacttaggatgtagagaacgcatagtcagtccacttagg 291
|||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 gcatagtcagtccacttaggatgtagagaatgcatagtcagtccacttagg 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
