CCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTGTTCAGCTCTGAGCCCCCTTTTTTAATGGGGTTATTTGATTTTCT
GGAGTCCACCTTCTTGACTTCTTTATATATTGGATATTAGTCCCCTATCC
GATTTGGGATGGGTAAAGATCCTCTTCCAATCTGTTGATGGCCTTTTTGT
CTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTTATGAGGT
CCCATTTATCGATTCTTGATCTTACAGCACAAGCCATTGCTGTTCTATTC
AGGAATTTTTCCCCTGTACCCATATCTTCAAGGCTTTTCCCTACTTTCTC
CTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTTCTTAATCCACT
TAGATTTGACCTTAGTACAAGGAGATAGAAATGGATCAATTTGCATTCTT
CTACATGATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTC
TTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATTAAGTGACCAT
AGGTGTGTAGTCTTAATTACAAACATGATTGGGCTGAGAATATCTAGGTG
ATCAACAAATTACAATTTTAGAAGTGTCTGTGAAAGGTATTTCCAGAAAC
TCTTAGACTATTATGGCTTGGACCTAATGAAGGTATTAACACCCTAATTG
ATTCTTAACAT

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTAGCAAGCCAAGGTAAGATGAGGAG
TGTTTTGCCGAAGATGAATGGCAAGTTGGGAGGAGTTGGTAGTCCACTGA
AGGGGCAGTGGAGGGCCATAAAGCCTAGCTAGGCATTAATCTCCAGGAGA
AAGCTAGGGCTAAGGTCATTATTGATATTATAAACTAAAACTGAAAAGGG
AGAAAGAAAACGAAGGCATGCTGCTCTTTCCATGGGTGACACAGTTTCAG
TTGGTGCATATTGAGCATTTCTACAGATTTAATTAAGCAATCAGATTGCT
TGAGTAGTCTCAATATTCAGTGCCTTTTATAGAGTTCTTTAATGACTATG
CATAGAATTATTCTGGATACTTTATGGACCATAGCAAGTGAAGCTTTATG
TCTTCTTCCCAAGAACAAAGTGTATCTTTCTACCACCACTCAAGCTAAAA
CAAAGATGGTTATTGTTGGTTTTGGTCATTGGGAAGATTTTTAGCGTCAT
GGCTAGAAATGTTCAGTCGATGAATTACGATGAATTAAAGAAGAGGTAAT
TTTGGTAAACAAAAGAACATATGGCTTTACCTCCTCATGATTCACTTGTG
AAATTCTGGCAATTTATTAGAGACTTTGCCGGTATCTGAGAAGACAAGGA
GAGGCGATGTTTCCAGC

Query= MSMg01no088_p11.g1 MSMg01no088_p11.g1 CHROMAT_FILE:
MSMg01no088_p11.g1 PHD_FILE: MSMg01no088_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:37 2005
         (591 letters)



>mm_chr5_45502134_45503124
          Length = 991

 Score = 1112 bits (575), Expect = 0.0
 Identities = 587/591 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttagcaagccaaggtaagatgaggagtgttttgccgaagatgaatggcaagttgggagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttagcaagccaaggtaagatgaggagtgttttgccgaagatgaatggcaagttgggagg 260

                                                                       
Query: 61  agttggtagtccactgaaggggcagtggagggccataaagcctagctaggcattaatctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 agttggtagtccactgaaggggcagtggagggccataaagcctagctaggcatcaatctc 320

                                                                       
Query: 121 caggagaaagctagggctaaggtcattattgatattataaactaaaactgaaaagggaga 180
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggagaaagccagggctaaggtcattattgatattataaactaaaactgaaaagggaga 380

                                                                       
Query: 181 aagaaaacgaaggcatgctgctctttccatgggtgacacagtttcagttggtgcatattg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaaaacgaaggcatgctgctctttccatgggtgacacagtttcagttggtgcatattg 440

                                                                       
Query: 241 agcatttctacagatttaattaagcaatcagattgcttgagtagtctcaatattcagtgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcatttctacagatttaattaagcaatcagattgcttgagtagtctcaatattcagtgc 500

                                                                       
Query: 301 cttttatagagttctttaatgactatgcatagaattattctggatactttatggaccata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttttatagagttctttaatgactatgcatagaattattctggatactttatggaccata 560

                                                                       
Query: 361 gcaagtgaagctttatgtcttcttcccaagaacaaagtgtatctttctaccaccactcaa 420
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 561 gcaagtgaagctttatgtcttcttcccaagaacaaagtgtatctctctaccaccactcag 620

                                                                       
Query: 421 gctaaaacaaagatggttattgttggttttggtcattgggaagatttttagcgtcatggc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctaaaacaaagatggttattgttggttttggtcattgggaagatttttagcgtcatggc 680

                                                                       
Query: 481 tagaaatgttcagtcgatgaattacgatgaattaaagaagaggtaattttggtaaacaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagaaatgttcagtcgatgaattacgatgaattaaagaagaggtaattttggtaaacaaa 740

                                                              
Query: 541 agaacatatggctttacctcctcatgattcacttgtgaaattctggcaatt 591
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaacatatggctttacctcctcatgattcacttgtgaaattctggcaatt 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space:   569961
Effective search space used:   569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)