Query= MSMg01no090_a03.b1 MSMg01no090_a03.b1 CHROMAT_FILE:
MSMg01no090_a03.b1 PHD_FILE: MSMg01no090_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:01 2005
(391 letters)
>mm_chr5_60794913_60795705
Length = 793
Score = 721 bits (373), Expect = 0.0
Identities = 385/389 (98%), Gaps = 2/389 (0%)
Strand = Plus / Minus
Query: 5 gaattctttccttgg-aaattggagg-aactgacctgaggccaatcaactgtgtcagttt 62
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 593 gaattctttccttggtaaattggaggaaactgacctgaggccaatcaactgtgtcagttt 534
Query: 63 gaaatttctcactgtgctagtaaacagatggagttttaaggttatggcccttcaaagcat 122
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 533 gaaatttctcactgtgctagtaaaccgatggagttttaaggttatggcccttcaaagcat 474
Query: 123 cttgataagataactaagtttcgaaatcagtatcttgtattggtattagaacatacacat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cttgataagataactaagtttcgaaatcagtatcttgtattggtattagaacatacacat 414
Query: 183 attttttcactctgaggacagtgagggttttaaaatatactcaaatactgaaaaactcac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 attttttcactctgaggacagtgagggttttaaaatatactcaaatactgaaaaactcac 354
Query: 243 aagttaatgactacatgtcataatatttttgagcttcctttgctatgtggttatgtggtt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aagttaatgactacatgtcataatatttttgagcttcctttgctatgtggttatgtggtt 294
Query: 303 tggtaggttttttttcttttgctgctattgatacaatacacaaatttataaacagggttt 362
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 293 tggtaggttttttttcttttgctgttattgatacaatacacaaatttataaacagggttt 234
Query: 363 tttttggaggggggtcattattctggaaa 391
|||||||||||||||||||||||||||||
Sbjct: 233 tttttggaggggggtcattattctggaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 793
Length adjustment: 9
Effective length of query: 382
Effective length of database: 784
Effective search space: 299488
Effective search space used: 299488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_a03.g1 MSMg01no090_a03.g1 CHROMAT_FILE:
MSMg01no090_a03.g1 PHD_FILE: MSMg01no090_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:01 2005
(285 letters)
>mm_chr5_60717533_60718217
Length = 685
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Plus
Query: 1 attcatgagaatctgcatgtggttagattaagcctgttcaccatgtaatctttgcttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcatgagaatctgcatgtggttagattaagcctgttcaccatgtaatctttgcttgga 260
Query: 61 ggtttttaaactatctagtgatttagaatattagacaaatgctaggctggtttcctttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtttttaaactatctagtgatttagaatattagacaaatgctaggctggtttcctttct 320
Query: 121 ctatactcagaattattctgaagccttgcataaggtctacatttttcctgtcaaaattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctatactcagaattattctgaagccttgcataaggtctacatttttcctgtcaaaattga 380
Query: 181 tctgctttcttagatcaaattgatgcatggaaaattgtcgagttttccccaaaacttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgctttcttagatcaaattgatgcatggaaaattgtcgagttttccccaaaacttaat 440
Query: 241 gttttatttttcagaaaaattctttattaagtaatcataaatatg 285
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttttatttttcagaaaaattctttattaagtaatcataaatatg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|