GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGT
GAGAGAACGTGCATGTTTGGCGAAGATGTTAGTAAAAATATGCTTCCTTG
GAGATTTTTATCCTGCTGAATAAATAGAGATATCTCAAAACATCAAACAC
CACTAGCTCTGCTTTCAACTATGACAATGATGGTATTGGTAAGGTGAGAA
ATGTTTATATTTTAATCTCACACATCTGCATTTAGCTCACAGAAATGAAT
TATACCCAAGAAAAATCAGAAAAAGGATAAGGGAACTGAAAATACTGTCT
ATTTTTAATAACTGACATCTGACAGTAAAATCCATATAATGAAGTCTTAT
TCTTTTTCCCCCGCCCCCCCCATGAAATGATGCCTGTAGAAGATATTTGG
ATATACACCCCTTGCAAAAGAAGATAGGGAATGGATGGTTTCATTACCCT
CTTCATTGTATATGAACGACAGTTCTGATCTCTCTCTGCCATGTGTTGAC
TGACTCCAATTCCGCCTTGTGTTAATCTTACCTACCATGACCACATATGG
CACATGTTCGTATTCTCCGTGGTGTATATAAAACTTCTTTAACTGGTTAA
AATATTATATCTTATCTTTTTTTAAGTCATGGTGGCTTATTTCTTTCATT
TCTCCTCTTTTCTCTTGTCCCTGTTTTTTTTTCTCCTCGTCCTCTTTTTC
TCCA

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATACATGTATTGAACCTGTTGATGTAGAG
GATCTTGTTTTCTCAGTGTCCACTGACTCTACTCTCTCCTCCTCTCTTTC
TGCCTCTTCCTTTGTATCGGTTCTCTCAGTCCAGATGGAAGTTATTTGAC
AGAAACATGTACAAATAACCACAGTAACAACAAATACAAATAGATTGGCA
TTTCAAATAGAATGAAAACTAGTGGGATATTCTCTAATACACTGACATAA
TTAAAATAACAGTTTGGAATATTTGTTGATACTTAAAAATAGAACAGAGC
ACAATTGTTAAAGGTACATCAGCTGCTCATCTGCCCAACTACTATACAAA
AAATTAAAGGCCATTTTCAAAAAAAATTCATAGTAACATTTTACAAGGCT
GGTGTTTAACTATGACAGAAAATTACCTATAGTTGTATTTTCAGGTAGAA
CAATAATAATGTGAGAGTCTTTGTTTTGTTTTTCTGATTTGTTTTGTCCA
ACAGTCTTTTAATAAAATGAGAATACTTAGAAATAATAAAGCTCTTTTTT
CTTTTTTTTCTTTTTTTTCACCTTGAAGTTGCCTTTTCATTAGGTGAGTA
AATGCTTATACCGATAATATTGTGGAAAATACCCACTTTTTTATTTATTC
CCATAAATTTA

Query= MSMg01no090_i13.b1 MSMg01no090_i13.b1 CHROMAT_FILE:
MSMg01no090_i13.b1 PHD_FILE: MSMg01no090_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:43 2005
         (314 letters)



>mm_chr5_62253844_62254557
          Length = 714

 Score =  571 bits (295), Expect = e-167
 Identities = 307/311 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctttgtgagagaacgtgcatgtttggcgaagatgttagtaaaaatatgcttcct 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggaattctttgtgagagaacgtgcatgtttggcgaagatgttagtaaaaatatgcttcct 455

                                                                       
Query: 64  tggagatttttatcctgctgaataaatagagatatctcaaaacatcaaacaccactagct 123
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tggagattcttatcctgctgaataaatagagatatctcaaaacatcaaacaccactagct 395

                                                                       
Query: 124 ctgctttcaactatgacaatgatggtattggtaaggtgagaaatgtttatattttaatct 183
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctgctttcaactataacaatgatggtattggtaaggtgagaaatgtttatattttaatct 335

                                                                       
Query: 184 cacacatctgcatttagctcacagaaatgaattatacccaagaaaaatcagaaaaaggat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cacacatctgcatttagctcacagaaatgaattatacccaagaaaaatcagaaaaaggat 275

                                                                       
Query: 244 aagggaactgaaaatactgtctatttttaataactgacatctgacagtaaaatccatata 303
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 274 aagggaactgaaaatactgtctatttttaataactgacatctgactgtaaaatccatata 215

                      
Query: 304 atgaagtctta 314
           | |||||||||
Sbjct: 214 acgaagtctta 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space:   215025
Effective search space used:   215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no090_i13.g1 MSMg01no090_i13.g1 CHROMAT_FILE:
MSMg01no090_i13.g1 PHD_FILE: MSMg01no090_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:43 2005
         (285 letters)



>mm_chr5_62165684_62166368
          Length = 685

 Score =  513 bits (265), Expect = e-150
 Identities = 280/285 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atacatgtattgaacctgttgatgtagaggatcttgttttctcagtgtccactgactcta 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 atacatgtattgaacctgttgatgtagaggatcttattttctcagtgtccactgactcta 260

                                                                       
Query: 61  ctctctcctcctctctttctgcctcttcctttgtatcggttctctcagtccagatggaag 120
           ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 261 ctctctcctcctctctttctgcctcttcctttgtatcagttctctgagtccagatggaag 320

                                                                       
Query: 121 ttatttgacagaaacatgtacaaataaccacagtaacaacaaatacaaatagattggcat 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 ttatttgacagaaacatgtacaaataaccacagtaacaataaatacaaatagattggcat 380

                                                                       
Query: 181 ttcaaatagaatgaaaactagtgggatattctctaatacactgacataattaaaataaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaaatagaatgaaaactagtgggatattctctaatacactgacataattaaaataaca 440

                                                        
Query: 241 gtttggaatatttgttgatacttaaaaatagaacagagcacaatt 285
           ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 gtttggaatatttgttgatacctaaaaatagaacagagcacaatt 485


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space:   186576
Effective search space used:   186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)