Query= MSMg01no090_j03.b1 MSMg01no090_j03.b1 CHROMAT_FILE:
MSMg01no090_j03.b1 PHD_FILE: MSMg01no090_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:46 2005
(192 letters)
>mm_chr5_53757166_53757757
Length = 592
Score = 340 bits (176), Expect = 2e-98
Identities = 188/192 (97%)
Strand = Plus / Plus
Query: 1 acagctagtcccactgtgattctccttcccctggctgccttaggcttccccacatgatct 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagctagttccactgtgattctccttcccctggctgccttaggcttccccacatgatct 260
Query: 61 gcttataatttccttacctctttctgtattgtgagcctctcctctctggactataaaact 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttataatttccttacctcttcctgtattgtgagcctctcctctctggactataaaact 320
Query: 121 cccaagagcagagttttataatttctttccagagctttgtaaccagtgcctaggattctc 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 cccaagagcagagttttataatttctttccagtgctttgtaaccagtgcctaggattctc 380
Query: 181 gctgcctggtgt 192
|||||||||||
Sbjct: 381 actgcctggtgt 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 592
Length adjustment: 8
Effective length of query: 184
Effective length of database: 584
Effective search space: 107456
Effective search space used: 107456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no090_j03.g1 MSMg01no090_j03.g1 CHROMAT_FILE:
MSMg01no090_j03.g1 PHD_FILE: MSMg01no090_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:46 2005
(188 letters)
>mm_chr5_53876486_53877072
Length = 587
Score = 333 bits (172), Expect = 5e-96
Identities = 184/188 (97%), Gaps = 1/188 (0%)
Strand = Plus / Minus
Query: 1 atatgttcaagaaaaatatgagggtaaatataatactgtgttaagtgaaagaagagcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atatgttcaagaaaaatatgagggtaaatataatactgtgttaagtgaaagaagagcatt 328
Query: 61 gcaaaagagcccgtgaaggtgggaaacacagattctggggatggtggtatgagaaagcca 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 327 gcaaaagagcccgtgaaggtgggaaacacagattctggggatggt-gtatgagaaagcca 269
Query: 121 ttcacatacccacatagcaggcttctgtgatggtgtccttatgaagtttggctcacaaag 180
|||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 268 ttcacatagccacatagcaggcttctgtgatggtgtccttataaagtttgactcacaaag 209
Query: 181 ttggccca 188
||||||||
Sbjct: 208 ttggccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 587
Length adjustment: 8
Effective length of query: 180
Effective length of database: 579
Effective search space: 104220
Effective search space used: 104220
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
