Query= MSMg01no090_p18.b1 MSMg01no090_p18.b1 CHROMAT_FILE:
MSMg01no090_p18.b1 PHD_FILE: MSMg01no090_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:20 2005
(310 letters)
>mm_chr5_85655477_85656186
Length = 710
Score = 480 bits (248), Expect = e-140
Identities = 288/302 (95%), Gaps = 2/302 (0%)
Strand = Plus / Plus
Query: 9 tctattgatgtacgtggtgttgcacagctgcccttgtatatataacatccttag-aggta 67
|||||||||||| || ||| |||||||||||||||||||||||| ||||||||| | |||
Sbjct: 209 tctattgatgtaggtagtgctgcacagctgcccttgtatatatagcatccttagta-gta 267
Query: 68 aggacttcagctaagtttcagcatgagatgggtgcacattgttagcccagttatcactta 127
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||
Sbjct: 268 aggacttcagctaagtttcagcacgagatgggtgcaaattgttagcccagttatcaccta 327
Query: 128 ggtatccttgttggatgtctcatctaacctaagtgtactagctggctttgtgtgcctcct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 328 ggtatccttgttggatgtctcatctaacctaagtgtactagctggctttgtgtgcttcct 387
Query: 188 gacctgtttgagttctagncctgacttcctttggtgatggacagcagcgtggaaaaccct 247
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 388 gacctgtttgagttctagtcctgacttcctttggtgaaggacagcagcgtggaaaaccct 447
Query: 248 ttcctccttaacttgcttcttggncctgatgtttgtgcaggaagagaaaccctgaataag 307
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 448 ttcctccttaacttgcttcttggtcctgatgtttgtgcaggaagagaaaccctgactaag 507
Query: 308 gc 309
||
Sbjct: 508 gc 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_p18.g1 MSMg01no090_p18.g1 CHROMAT_FILE:
MSMg01no090_p18.g1 PHD_FILE: MSMg01no090_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:20 2005
(286 letters)
>mm_chr5_85774312_85774997
Length = 686
Score = 466 bits (241), Expect = e-136
Identities = 250/253 (98%)
Strand = Plus / Minus
Query: 34 gtctgtcattctttctaatgctatggtgcctatttcaacatttttagtattggagttcag 93
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtctgccattctttctaatgctatggtgcctatttcaacatttttagtattggagttcag 433
Query: 94 tgtaaagatgcatataaatttgtgtattaacatttatttatataacattatgtatgtatg 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgtaaagatgcatataaatttgtgtattaacatttatttatataacattatgtatgtatg 373
Query: 154 taataattaacatgtttctatttggtttggaattctctcacgaaaagcataagggtgaag 213
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 372 taataattaacatgtttctatttggtttggaattctctcatgaaaagcataagggtgaag 313
Query: 214 tttcatgaaacaaatcttcctcatagttttgttttaaaaatctaatctttagttaagcca 273
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 312 tttcatgaaacaaatcttcctcatagttttgttttaaaaatctaatctttagttaatcca 253
Query: 274 tttacaaattaga 286
|||||||||||||
Sbjct: 252 tttacaaattaga 240
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
