Query= MSMg01no091_l22.b1 MSMg01no091_l22.b1 CHROMAT_FILE:
MSMg01no091_l22.b1 PHD_FILE: MSMg01no091_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:21 2005
(130 letters)
>mm_chr5_52772635_52773165
Length = 531
Score = 226 bits (117), Expect = 3e-64
Identities = 126/129 (97%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 1 ccgtgcgagatgaataaactccttctggaaattactctcgtg-aattacttctcctgaga 59
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 201 ccgtgcgagatgaataaactccttctggaaattactctcgtgaaattacttcttctgaga 260
Query: 60 cagttaatagtatattctggcgcccctgaaaaattaattaaccttcctcagcgcagcctc 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 cagttaatagtatattctggcgcccctgaaaaattaattaaccttcctcagtgcagcctc 320
Query: 120 acccctaaa 128
|||||||||
Sbjct: 321 acccctaaa 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 130
Length of database: 531
Length adjustment: 8
Effective length of query: 122
Effective length of database: 523
Effective search space: 63806
Effective search space used: 63806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_l22.g1 MSMg01no091_l22.g1 CHROMAT_FILE:
MSMg01no091_l22.g1 PHD_FILE: MSMg01no091_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:21 2005
(234 letters)
>mm_chr5_52943626_52944259
Length = 634
Score = 377 bits (195), Expect = e-109
Identities = 225/235 (95%), Gaps = 2/235 (0%)
Strand = Plus / Minus
Query: 1 tgtttgaatttgtgcgcccgtgcccaggtgtgtttactgctggagaaactc-caagttct 59
|||||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 434 tgtttgaa-ttgtgtgcccgtgcccaggtgtgtttacagctggagaaactcacaagttct 376
Query: 60 gctctcttgtggccaactggaacattgaaggaagtaaccttgtctttcaccctagagctg 119
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 375 gctctcttgtgggcaactggaagattgaaggaagtaaccttgtctttcaccctagagctg 316
Query: 120 gggctattcagctgtgtaattggcaggtgtcccttactcaggcaggccactaaggggtta 179
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 315 gggctattcagctgtgtaattggcaggcgtcccttgctcaggcaggccactaaggggtta 256
Query: 180 tttactatgctatctggccaataaatcagaggtcacggtcaatgacatttgtgca 234
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tttactatgccatcaggccaataaatcagaggtcacggtcaatgacatttgtgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
