Query= MSMg01no091_p20.b1 MSMg01no091_p20.b1 CHROMAT_FILE:
MSMg01no091_p20.b1 PHD_FILE: MSMg01no091_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:41 2005
(114 letters)
>mm_chr5_93545391_93545904
Length = 514
Score = 219 bits (113), Expect = 6e-62
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 2 gccggcgctaagggctggggatgtctcagcagagagcgttgggcagcagtgcttaagagc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gccggcgctaagggctggggatgtctcagcagagagcgttgggcagcagtgcttaagagc 261
Query: 62 ttccttttcaattcaactctttgtggtctgaggctaacttttgtcagggctgg 114
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttccttttcaattcaactctttgtggtctgaggctaacttttgtcagggctgg 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 114
Length of database: 514
Length adjustment: 8
Effective length of query: 106
Effective length of database: 506
Effective search space: 53636
Effective search space used: 53636
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_p20.g1 MSMg01no091_p20.g1 CHROMAT_FILE:
MSMg01no091_p20.g1 PHD_FILE: MSMg01no091_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:41 2005
(340 letters)
>mm_chr5_93694003_93694742
Length = 740
Score = 553 bits (286), Expect = e-162
Identities = 314/336 (93%), Gaps = 21/336 (6%)
Strand = Plus / Minus
Query: 2 ctgactttccacttccatccatttaacactttaatatggaaagacagcagccctttaaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ctgactttccacttccatccatttaacactttaatatggaaagacagcagccctttaaaa 277
Query: 62 tactagccccaaattacatcctctccccactgcaaacttttaatgattttccaggaagtg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tactagccccaaattacatcctctccccactgcaaacttttaatgattttccaggaagtg 217
Query: 122 agattgttccgattttctctctttgctctccctctcttctctcttcttctctcttct--- 178
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 agattgctccgattttctctctttgctctccctctcttctctcttcttctctcttctctt 157
Query: 179 ------------tctctcttctctcttttctctctccctccccctccc------tctccc 220
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 156 cttctctcttcttctctcttctctcttttctctctccctccccctccccctccctctccc 97
Query: 221 tgaagtctttctgcagactggccttgtccttatctcctcagctagctgcaccagacctgt 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 tgaagtctttctgcagactggccttgtccttatctcctcagctagctgcaccagacctgt 37
Query: 281 aggtgctgtttattaaaacaagacattcttcctgtg 316
||||||||||||||||||||||||||||||||||||
Sbjct: 36 aggtgctgtttattaaaacaagacattcttcctgtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
