Query= MSMg01no093_g21.b1 MSMg01no093_g21.b1 CHROMAT_FILE:
MSMg01no093_g21.b1 PHD_FILE: MSMg01no093_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:48:02 2005
(177 letters)
>mm_chr5_88109871_88110449
Length = 579
Score = 290 bits (150), Expect = 3e-83
Identities = 171/179 (95%), Gaps = 2/179 (1%)
Strand = Plus / Minus
Query: 1 aaaactgaagnattgtctttactatgtgtcagcaga--ttttttttggttctattattcc 58
|||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 379 aaaactgaagtattgtctttactatgtgtcagcagattttttttttggttctattattaa 320
Query: 59 aatgggtgtcactgactgaatgtagaattttgctctctgtgttactgagaaggcattttg 118
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 319 aatgggtgtcactgactgaatgtagaattttgctctccgtgttactgagaagggattttg 260
Query: 119 agtctcagatactagaaagcatgacctcatcactgactggtcatttctattctaaatct 177
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 259 agtctcagatactagaaagcatgacatcatcactgactggtcatttctattctaaatct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 579
Length adjustment: 8
Effective length of query: 169
Effective length of database: 571
Effective search space: 96499
Effective search space used: 96499
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_g21.g1 MSMg01no093_g21.g1 CHROMAT_FILE:
MSMg01no093_g21.g1 PHD_FILE: MSMg01no093_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:48:03 2005
(391 letters)
>mm_chr5_88045953_88046743
Length = 791
Score = 714 bits (369), Expect = 0.0
Identities = 384/389 (98%)
Strand = Plus / Plus
Query: 3 tctttggcctttaggataggtgcttttatagttgtttcccataggaaatctggcactctg 62
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 203 tctttggcctttaggataggtgcttttatagttgtttcagagaggaaatctggaactctg 262
Query: 63 tcttggagaatgacccccttttcccatagttttgtaataggaccagagttgagattcctt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcttggagaatgacccccttttcccatagttttgtaataggaccagagttgagattcctt 322
Query: 123 gtcgaaggcttaaatttacttagatctaagggaacccacaaccaaacactaggtagatcc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtcgaaggcttaaatttacttagatctaagggaacccacaaccaaacactaggtagatcc 382
Query: 183 aggagaaaacccacaaagagggaagtgttgtaggaaccagagaagttgaggacaccaaga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aggagaaaacccacaaagagggaagtgttgtaggaaccagagaagttgaggacaccaaga 442
Query: 243 gaacacagctcactaaatcaaataattagtgttcataggggctcacagacagtgaagcaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaacacagctcactaaatcaaataattagtgttcataggggctcacagacagtgaagcaa 502
Query: 303 caatcatggaacttatatgtatctaagctatttcctctccatatatgttacacttgtgta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 caatcatggaacttatatgtatctaagctatttcctctccatatatgttacacttgtgta 562
Query: 363 gcttgatatccttgtatgactcctaacag 391
||||||||| |||||||||||||||||||
Sbjct: 563 gcttgatattcttgtatgactcctaacag 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
