CAGAATTTGCGGCGCTATACGACTCCTATATCGAGAGATCCGCGGAATTC
TGAAAATGCACGCATATGAAATATGTTATACTCGTTATTAGAAAAGAAGA
TAAAGGAGGCCAGCTAAACTCCTCTATCCCATTTTTTTTCCTTATTAGGA
AAAAGGCATTTATCTAGAAATATTCTCCAAAATGTTTTGCAACTAAGCCT
GACATACGAACTGTCAATCTTAGGTAAATTTCCAAATGTGTCCTTCTTCA
TCCTTCTCTTTTATGATTTCAAGAATGACAGCTAATTTTATATGTTAGCT
TGTCTTAGTTAAGCAGTGCTATAAAACTCCTCTCTCTCTCCCTCTCCCCC
TCCCTCCATCTCTGTCTGTCTCTTTCTATCTCTGCCTCTTTATCTCTGTT
TCTCTGTCTCTGTGTGTGTCTGTGTCTATGTCTGTGTCTGCCTGTGCTTA
TGTCTCTCTCTGTGTCTGGCTCTCTGTGACTCTGTCTCTCTCCCTTCCTC
CCTCCCCTCTTCACTTCCTCTATGAATGTATGCATACATGTTTATAAGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCGCCACACCAAAATCACACT
ATGAACCTAAATTAGAAAATCCATATCCCCACCCGATACTTCTCCCCCAT
CTTTAATTTCTATCCCTCTTACACCCCTACCCTAACTCAT

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTTTATATTTTGGATATTAACCCTCTAT
TGGTTATGGTGTTAGTGAAGATTTTTTCCAATGTGTAGGTTGCTGACTTG
TCTTATTGACTTTGTCCTTTACCTTAGAGAAGCCTTCCAGGATCAAATAG
AATGGCTCAGTATATAAAAATCCATTAACATGACCCATTATATAAACAAA
CTCAAAGAAAAAGATCACATGAACATTGCCTTAGATGCAGAAAAAGCATT
TGACAAAATACAATACCCCTTCAAAGTATTGGAGAGATCAGGAATTCAAG
GTTCATGTTAAACATAATAAAAGCAATTACAGCAAACTGAAATCCAATAT
CAAATTAAATGGAGACATACTTGAAGCATTCCCACTAAAATCGGGGACAA
GTCAAGGATGCATATTCTCCACAAATCTATTCAATAGAGTACTCGAAGTG
CTAGCTAGAACAATAAGACAAGAAAAAGGGATCAAGGGGATACAAATTGA
AAAAAAAGAAGAAATAAAGATATCACTATTTGCAGATGATATGATAGTAT
ATATAGGTGATCCCAGAAATTGTACCAGAGAACCTCTCATGATGATAAAC
AAGTTCAGCAAACTAGCTGGATATTAAATTAACTCAAATAAATCACTATC
CTTCCTTTATACAACT

Query= MSMg01no094_o11.b1 MSMg01no094_o11.b1 CHROMAT_FILE:
MSMg01no094_o11.b1 PHD_FILE: MSMg01no094_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:44 2005
         (541 letters)



>mm_chr5_57615260_57616202
          Length = 943

 Score =  878 bits (454), Expect = 0.0
 Identities = 517/544 (95%), Gaps = 13/544 (2%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctgaaaatgcacgcatatgaaatatgttatactcgttattagaaaagaagataaa 66
           |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctgaaaatgcatgcatatgcaatatgttatactcgttattagaaaagaagataaa 266

                                                                       
Query: 67  ggaggccagctaaactcctctatcccatttttttt--ccttattaggaaaaaggcattta 124
           |||||||||| ||| ||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 267 ggaggccagcaaaagtcctctatcccattttttttttccttattaggaaaaaggcattta 326

                                                                       
Query: 125 tctagaaatattctccaaaatgttttgcaactaagcctgacatacgaactgtcaatctta 184
           |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 327 tctagaaagattctccaaaatgttttgcagctaagcctgacatatgaactgtcaatttta 386

                                                                       
Query: 185 ggtaaatttccaaatgtgtccttcttcatccttctcttttatgatttcaagaatgacagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 387 ggtaaatttccaaatgtgtccttcttcatccttctcttttatgatttcaagaatggcagc 446

                                                                       
Query: 245 taattttatatgttagcttgtcttagttaagcagtgctataaaactcctctctctctccc 304
           |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 447 taattttatatgttagcttgtcttagttaatcagtgctatacaactcctctctctctccc 506

                                                                       
Query: 305 tctccccctccctccatctctgtctgtctctttctatctctgcctctttatctctgtttc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tctccccctccctccatctctgtctgtctctttctatctctgcctctttatctctgtttc 566

                                                                       
Query: 365 tctgt--------ctctgtgtgtgtctgtgtctatgtctgtgtctgc--ctgtgcttatg 414
           |||||        |||||||||||||||||||||||||||||||||   |||||||||||
Sbjct: 567 tctgtttctctgtctctgtgtgtgtctgtgtctatgtctgtgtctgtgtctgtgcttatg 626

                                                                       
Query: 415 tctctctctgtgtctggctctctgtgactctgtctctctcccttcctccctcccctcttc 474
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 627 tctctctctgtgtctggctctctgtgactctgtctctctcccttcctcccgcccctcttc 686

                                                                       
Query: 475 acttcctctatgaatgtatgcatacatgtttataagtgtgtgtgtgtgtgtgtgtgtgtg 534
           |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 687 acttcctctatgaatgtatgcatacatgtttata-gtgtgtgtgtatgtgtgtgtgtgtg 745

               
Query: 535 tgtg 538
           ||||
Sbjct: 746 tgtg 749


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 943
Length adjustment: 10
Effective length of query: 531
Effective length of database: 933
Effective search space:   495423
Effective search space used:   495423
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)