Query= MSMg01no095_h18.b1 MSMg01no095_h18.b1 CHROMAT_FILE:
MSMg01no095_h18.b1 PHD_FILE: MSMg01no095_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:31 2005
(320 letters)
>mm_chr5_29270456_29271175
Length = 720
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%), Gaps = 2/318 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttcagtctgaccttgtattcgagaactgtgtttgctctgagacaag-attga 62
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 204 ggaattctttcagtctgaccttgtattcgagaactgtgtttgctctgagacaagtattga 263
Query: 63 ctttatgtgaggccatcgctcgttgagcctgatgtagcatgttcctccgtaaattttaaa 122
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttatgtgaggccat-gctcgttgagcctgatgtagcatgttcctccgtaaattttaaa 322
Query: 123 ggaccacaggttcaagaggcagcttttaactcacagatgcttgaattggctaaagagatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 323 ggaccacaggttcaagaggcagcttttaactcacagatgcttgaattggctaaagtgatg 382
Query: 183 ctatctctcttcaaaggaggagaagctttaggtcccaagggaaggatcgcccagggtgga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctatctctcttcaaaggaggagaagctttaggtcccaagggaaggatcgcccagggtgga 442
Query: 243 acagatgctgaaccgggactccaagtctttgttttccactctctaccatttttgttttgt 302
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 443 acagatgctgaaccgggactccaagtctttgttttccactctccaccatttttgttttgt 502
Query: 303 tttgtaattatggggaaa 320
||||||||||||||||||
Sbjct: 503 tttgtaattatggggaaa 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_h18.g1 MSMg01no095_h18.g1 CHROMAT_FILE:
MSMg01no095_h18.g1 PHD_FILE: MSMg01no095_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:31 2005
(292 letters)
>mm_chr5_29439504_29440194
Length = 691
Score = 511 bits (264), Expect = e-149
Identities = 285/292 (97%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 1 agtctaatcccgaaaaataaatttatggacagggtaggaatgcattttccacgagtattt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 491 agtctgatcccgaaaaataaatttatggacagggtaggaatgcattttcca-gagtattt 433
Query: 61 gacattgctcatcacttatcctttcgactgctcagctatgggaaatactcttgaggagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gacattgctcatcacttatcctttcgactgctcagctatgggaaatactcttgaggagga 373
Query: 121 tatacttggcaggtgtgtgcagctaggtcacatatgcttcctagaagggatgcctgagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tatacttggcaggtgtgtgcagctaggtcacatatgcttcctagaagggatgcctgagga 313
Query: 181 catcatgtgtttccagggtgatatgttgtggttagatgtagaaatcgctcacttcctgta 240
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 312 catcatgtgtttccagggtgatatgttgtagttagatgtagaaatcgctcatttcctgta 253
Query: 241 ctgaagttcccattcccatggtgactgaatttggacactggggcatgcgata 292
||||||||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 252 ctgaagttcccgttcccctggtgactgaatttggagactggggcatgcgata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
