Query= MSMg01no098_e15.b1 MSMg01no098_e15.b1 CHROMAT_FILE:
MSMg01no098_e15.b1 PHD_FILE: MSMg01no098_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:21 2005
(386 letters)
>mm_chr5_38082601_38083388
Length = 788
Score = 590 bits (305), Expect = e-173
Identities = 362/383 (94%), Gaps = 6/383 (1%)
Strand = Plus / Plus
Query: 8 gaattcctactccc---gtcatgctgacttatgtcatggtcctctcacaagcttgggtaa 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 208 gaattcctactc--aatgtcatgctgacttatgtcatggtcctctcacaagcttgggcaa 265
Query: 65 gtgtgggacactgtaccagcatattgttctaccagccatgtgcaccccagagccccgcat 124
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtgtgggacactgtaccagcaggttgttctaccagccatgtgcaccccagagccccgcat 325
Query: 125 gcatctccatcagtgtccgatgcccacacgcctctccatgagtacagcagaaccctacac 184
||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 326 gcatctccatcagtgtccgatgcccacacttctctccgtgagtacagcagaaccctacac 385
Query: 185 ccctctctacgaatgac-tagaaccccatattcctttctgttagtgccctgaaaccctct 243
||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |
Sbjct: 386 ccctctctacgaatgacctaggaccccatattcctttctgttagtgccctgaggcccttt 445
Query: 244 atccctctgtatcagtgcaccctctggcttgtgtatggagtgagtggggagacaagtcta 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 446 atccctctgtatcagtgcaccctctggcttgtgcatggagtgagtggggagacaagtcta 505
Query: 304 tctcctggagcaataagctagggtttggtgtactgctgtgctgagatccagccgcgggga 363
||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 506 tctcctggagcaatatgctagggtttggtgtactgctgtgctgagatccagccatgggga 565
Query: 364 aaccactcggtgagaactctgag 386
|||||||||| ||||||||||||
Sbjct: 566 aaccactcggggagaactctgag 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 788
Length adjustment: 9
Effective length of query: 377
Effective length of database: 779
Effective search space: 293683
Effective search space used: 293683
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_e15.g1 MSMg01no098_e15.g1 CHROMAT_FILE:
MSMg01no098_e15.g1 PHD_FILE: MSMg01no098_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:21 2005
(405 letters)
>mm_chr5_38216680_38217485
Length = 806
Score = 725 bits (375), Expect = 0.0
Identities = 401/419 (95%), Gaps = 17/419 (4%)
Strand = Plus / Minus
Query: 1 ctatccctccgtgctcggataattacccctaaatggccacggcagccccttgtgtttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctatccctccgtgctcggataattacccctaaatggccacggcagccccttgtgtttcct 413
Query: 61 ggagattagagcccggcagtcatcaatgcacagtcccggtgagccgccaatcacctcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggagattagagcccggcagtcatcaatgcacagtcccggtgagccgccaatcacctcctc 353
Query: 121 cacctcccccggagccgcgagcctgggccctgggataagaggccatataaagaaaag--- 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cacctcccccggagccgcgagcctgggccctgggataagaggccatataaagaaaagccc 293
Query: 178 -cccccccccaactccccaacagcctgttcgaacccagtttacaaggtcttctgtggtcc 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ccccccccccaactccccaacagcctgttcgaacccagtttacaaggtcttctgtggt-- 235
Query: 237 ccccccctccaactttccttctttttgtatcagtc----------aaacaaaacaaaaca 286
|||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 234 -ccccactccaactttccttctttttgtatcagtcaaacaaaacaaaacaaaacaaaaca 176
Query: 287 aaacacgtttccttcgaaatcgggcaaacaaaacttcttaagccttgcaccaaagatata 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 aaacacgtttccttcgaaatcgggcaaacaaaacttcttaagccttgcaccaaagatata 116
Query: 347 cctccaggaactgcttatttttcctactggcccatcaaatgggcctccactctgcacca 405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 cctccaggaactgcttatttttcctactggcccatcaaatgggcctccactctgcacca 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 806
Length adjustment: 9
Effective length of query: 396
Effective length of database: 797
Effective search space: 315612
Effective search space used: 315612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
