Query= MSMg01no098_j05.b1 MSMg01no098_j05.b1 CHROMAT_FILE:
MSMg01no098_j05.b1 PHD_FILE: MSMg01no098_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:44 2005
(412 letters)
>mm_chr5_74177369_74178180
Length = 812
Score = 766 bits (396), Expect = 0.0
Identities = 408/412 (99%)
Strand = Plus / Minus
Query: 1 agtagtagctgtcgtgcctgggtgtagaatgaggaagatggaagtcagtcagtgctggag 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 612 agtagtagctgtcgtgcctgggtgtagaatgaggaagatgggagtcagtcagtgctggag 553
Query: 61 gtgatgtctcctcaggtaataggacataaaagatgtgcttctagactcacctttgaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gtgatgtctcctcaggtaataggacataaaagatgtgcttctagactcacctttgaatat 493
Query: 121 tctgcaccaccccacactctctttgggaatgaggaggtagtgtgggaaacacaagcctgg 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tctgcaccacctcacactctctttgggaatgaggaggtagtgtgggaaacacaagcctgg 433
Query: 181 tttcctgtggcattcaccatcaagggatgctcagcggtaacttagcaagacattccaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tttcctgtggcattcaccatcaagggatgctcagcggtaacttagcaagacattccaact 373
Query: 241 caagggctaattaaagagacatttacaaatgcacacaaatgcaggtctgactataggctg 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 caagggctaaataaagagacatttacaaatgcacacaaatgcaggtctgactataggctg 313
Query: 301 ttcgcactgactccaagacttcttcggggtcggaatctctttgggtctttctcttctcag 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 312 ttcgcactgactccaagacttcttccgggtcggaatctctttgggtctttctcttctcag 253
Query: 361 cacgggtgtgggcttttgtcatccacgaattctatcacaaatcccaaggtgg 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cacgggtgtgggcttttgtcatccacgaattctatcacaaatcccaaggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_j05.g1 MSMg01no098_j05.g1 CHROMAT_FILE:
MSMg01no098_j05.g1 PHD_FILE: MSMg01no098_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:44 2005
(240 letters)
>mm_chr5_74032957_74033596
Length = 640
Score = 383 bits (198), Expect = e-111
Identities = 217/224 (96%), Gaps = 2/224 (0%)
Strand = Plus / Plus
Query: 1 actctgtagagcaggctagctttgaactcacagagatactgcctctgcctcctgagagct 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 203 actctgtagagcaggctagctttgaactca--gagatactgcctctgcctcctgagagct 260
Query: 61 ggaattagaagattgttgccatgacactgggctttggagaatttccttaaaatcatttta 120
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 261 ggaattagaagattgttgccatgacactgggatttggagaatttcattaaaatcatttta 320
Query: 121 tctgatttctttccttcaatgcttcctctgctctcattttccgaatctccgtttatgaga 180
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgatttctttccttcgatgctttctctgctctcattttccgaatctccgtttatgaga 380
Query: 181 ctgcttccagaacgatgctttagctttgtaggactctatggaag 224
||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 ctgcttccagaacgatgctctagctttgtaggactctatggaag 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
