CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTGATCTTCCCAGAACTTTTATCATGAATGGGTGTTGGATCTTGTC
AAATGCTTTTTCTGCATCCAACGAGATGATCATGTGGTTTTTGTCTTTGA
GTTTGTTTATATAGTGGATTACATTGATGGATTTTCGTATATTAAACCAT
CCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCTTT
AATGTGTTCTTGGATTCGGTTAGCAAGAATTTTAATGAGGATTTTTGCAT
CGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGATCT
TTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGAGTTGGG
TAGAGTACTTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAGAACTGGAA
TTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCATCTGGT
CCTGGGATTTTTTTGGCTGGGAGATTATTTATAACTGCTTCTATTTCTTT
AGGGGATATGGGACTATTTAGAAGGTCAACTTGATCCTGATTCCACTTTG
GAACCTGGTACCTGTCCAGAAATTTATCCCTTTCCCCCCAGGTTTCCCAG
TTTTGTTGACTATACCCTTTTTTACCAGGATCTGATGCCGTTTTGGACTT
CTTCCGC

GAATACTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCATGGGGAAATGGATTGCTATGCTAAT
TATTGTCAGAGTGATATAGTAGGATTACCTGTATGCAGTAATTCATGTTT
CTCTCTTTCACTTCCACCATTTTTGGTAATGTCCTCTTCAGTAATATAAA
CTTAACTACTTGTTTAAATCATGCTGTGTCCTCATAACACAAAACAGCAA
ACTGAATCTACTCTACTGAATTGACCTTTGACGTAGGCTTATCTGAAGGA
GATTTAATAACCAGATGTGAGCAGATTCTGTTCCTCAGAAAACAATACCT
CCAAACCCCAAACTCATTTTATCCTATTAGGTACAGAGAAACAGAAGTAA
AGATGGGATTAGTCTAGGTTGAGGAGAATGAAGGCAGAGACAGAGGTAGG
AAGGGAGGAAGAGAGAAATAGAAAGGATGGGAGGAAAGAAGAGGTGAGGT
ATATCTATATATATATATATATATGCTTTACCTATTAGCTTTACCTATGC
TTTGTTCTGAAAATTTCTCTCTCAAATCTCTATTTCCCTTTCCTTGTCCA
TATGCCACTTATACTCCTCCTATCCACTTTGCCATTCCCCTTTTTCTCTC
CCACTACCTCCCCCCTCTAACCACCCCCCCCCACCCCCCTTCTAATCTCA
TATATCAACATCTTCTCTTTCAATAAACCATTTTCTT

Query= MSMg01no100_k13.g1 MSMg01no100_k13.g1 CHROMAT_FILE:
MSMg01no100_k13.g1 PHD_FILE: MSMg01no100_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:58:36 2005
         (433 letters)



>mm_chr5_69149071_69149903
          Length = 833

 Score =  650 bits (336), Expect = 0.0
 Identities = 375/388 (96%), Gaps = 2/388 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catggggaaatggattgctatgctaattattgtcagagtgatatagtaggattacctgta 60
           ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||||
Sbjct: 201 catggggaaatggattgttatgctaattattgtcagagttatatagtgggattgcctgta 260

                                                                       
Query: 61  tgcagtaattcatgtttctctctttcacttccaccatttttggtaatgtcctcttcagta 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tgcagtaattcatgtttctctctttcacttctaccatttttggtaatgtcctcttcagta 320

                                                                       
Query: 121 atataaacttaactacttgtttaaatcatgctgtgtcctcataacacaaaaca-gcaaac 179
           |||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||
Sbjct: 321 atataaacttaactacttgtttaaatcatgctgtgtcctcataatacaaaacaag-aaac 379

                                                                       
Query: 180 tgaatctactctactgaattgacctttgacgtaggcttatctgaaggagatttaataacc 239
           |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 380 tgaatctactctactgaactgacctttgacttaggcttatctgaaggagatttaatcacc 439

                                                                       
Query: 240 agatgtgagcagattctgttcctcagaaaacaatacctccaaaccccaaactcattttat 299
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggatgtgagcagattctgttcctcagaaaacaatacctccaaaccccaaactcattttat 499

                                                                       
Query: 300 cctattaggtacagagaaacagaagtaaagatgggattagtctaggttgaggagaatgaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctattaggtacagagaaacagaagtaaagatgggattagtctaggttgaggagaatgaa 559

                                       
Query: 360 ggcagagacagaggtaggaagggaggaa 387
           ||||||||||||||||||| ||||||||
Sbjct: 560 ggcagagacagaggtaggatgggaggaa 587


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space:   349376
Effective search space used:   349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)