CTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTACTTCTTCGAGCTTACACTTCAAATACTTCTATTATATATAACA
AGTACATGATTATTCAGTTGAGGGTCATCTATATTAATATTAGAAAGTTA
AATTACATAAAAATTATAGTACATTTATACAGCTAAATATTATACAGTTA
AAATAACTAAACAGCACCATAGGAATCTATTTCCACAACATACATGCTTA
CTTTATGCAGTACCACTTACACAACAAGAAGAAATACAGTTTAAAATTCA
TATACTGGTGCAACTGAATGGCTAAAGAACAGGTACAGAAAAGCCACCTT
CTTCTCACTAGCTAACTTTCACACACTTTTAATTGCTTACCATAAACGAA
TTCATTTAAAATAATCACTTTTAAAGATAAAAATCAATTATTTGTGTTGC
TTCCAGTCCTTTTTAAAATGCTCAAGGACAGAGGAACAAAACAGGTAGCT
TGCTCATCCTCACACGACCAACATTTTGCATAAGTGCCTCACATATAGAG
GCCAGAGACTATGTTGTACCTCAAATATAGAGGCCAGAGACTATGTTGTG
CCTCATATATAGAGGACAGACACTATGTTGTGCCTCACATATAGAGGACA
GACACTATGCTGTGCCTCACATATAGAGGACAGACATTATGCTGTGCCTC
ACATATAGAGGAC

TAATGTTGATTGGGCGGGCGGGAAGTGGGGCGCGGCANNNNCNCCGGAGG
CNNNNNCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAGGCCATCTGAAGCTC
AAGAAGGAAAACCAAAATGTGGATGTTTCAGTCTTTCTTAGAAGGGGGAA
CAAAATAATCACAGGAGGTAGAGGGTAGGAGGAACTTGGGAGGAAGAGAG
GAAGAAGAGGGAGAAAATGGGGGCCAGGATCAGGTATGAGAGGAGACAGG
GATGATATACGGAGGGTCAGAAATTTGAACAGAGGTGTGTAGGTATGGGG
GACAGGAACTGGGGATAGCCACAAGCTAGTTTTTTATGCCAAGAAAGCAA
GAGGCTCTTGGAACCCAACAGGGATGAGATCAGCTGAAATAGCCAACAAT
AGGGGAGGGAGAACCTGTAGAGGCTCCTGGTTGGCGGATAGGACTACCCA
CTCATCCCCTTAATTCTTAGCCCTTCAGGATCCTGTCTATAGGAAATATG
GGGACAAAGTGTAATGCAGAGACTGAAGGAATGGGCATCCTGAGACTGGC
CCACCTGGGAATCCATCCCATATACTGTTCCCAAATGGCAAACAGGACTG
TGGGAGGTCTACAAGGAGCTTGCTGACATGATGCCTGATATAGGTGGTCT
CCTGATAGGTTTTGCCAGAAGCCGGACATAAACTTGAGGCTTATAGCCCG
CAATCCTTTCTCATGGTTCTTTAGTCTGGCGTTCCCCCATTACAGGAAGT
AATAAAAACGGAG

Query= MSMg01no101_e07.b1 MSMg01no101_e07.b1 CHROMAT_FILE:
MSMg01no101_e07.b1 PHD_FILE: MSMg01no101_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:25 2005
         (668 letters)



>mm_chr5_96644379_96645446
          Length = 1068

 Score = 1145 bits (592), Expect = 0.0
 Identities = 625/636 (98%), Gaps = 2/636 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctacttcttcgagcttacacttcaaatacttctattatatataacaagtacatga 64
           |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 839 gaattctacttcttagagcttacacttcaaatacttccattatatataacaagtacatga 780

                                                                       
Query: 65  ttattcagttgagggtcatctatattaatattagaaagttaaattacataaaaattatag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ttattcagttgagggtcatctatattaatattagaaagttaaattacataaaaattatag 720

                                                                       
Query: 125 tacatttatacagctaaatattatacagttaaaataactaaacagcaccataggaatcta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tacatttatacagctaaatattatacagttaaaataactaaacagcaccataggaatcta 660

                                                                       
Query: 185 tttccacaacatacatgcttactttatgcagtaccacttacacaacaagaagaaatacag 244
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 659 tttccacaatatacatgcttactttatgcagtaccacttacacaacaagaaaaaatacag 600

                                                                       
Query: 245 tttaaaattcatatactggtgcaactgaatggctaaagaacaggtacagaaaagccacct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tttaaaattcatatactggtgcaactgaatggctaaagaacaggtacagaaaagccacct 540

                                                                       
Query: 305 tcttctcactagctaactttcacacacttttaattgcttaccataaacgaattcatttaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 539 tcttctcactagctaactttcacacacttttaattgcttaccataaatgaattcatttaa 480

                                                                       
Query: 365 aataatcacttttaaagataaaaatcaattatttgtgttgcttccagtcctttttaaaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aataatcacttttaaagataaaaatcaattatttgtgttgcttccagtcctttttaaaat 420

                                                                       
Query: 425 gctcaaggacagaggaacaaaacaggtagcttgctcatcctcacacgaccaacattttgc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gctcaaggacagaggaacaaaacaggtagcttgctcatcctcacacgaccaacattttgc 360

                                                                       
Query: 485 ataagtgcctcacatatagaggccagagactatgttgtacctcaaatatagaggccagag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ataagtgcctcacatatagaggccagagactatgttgtacctcaaatatagaggccagag 300

                                                                       
Query: 545 actatgttgtgcctcatatatagaggacagacactatgttgtgcctcacatatagaggac 604
           |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 299 actatgctgtgcctcacatatagaggacagacactatgctgtgcctcacatatagaggac 240

                                               
Query: 605 agacactatgctgtgcctcacata-tagaggacaga 639
           | |||||||||||||||||||||| | |||||||||
Sbjct: 239 aaacactatgctgtgcctcacatact-gaggacaga 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)