CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAATCCGCGGAAT
TCCAGGACAGCCTTGCATATAAGAGAAACCCTGTCTCAAAAAAGCAAACA
AACAAAAACCAGAATGCACAACTTGCAAGTAATGAACAACTTGCAGTAAT
CAGTTCTTTCCTTCCACAGTGTGGGTCCCAACGGTTACCGGGCTTGGCAG
CAAGTGCTTTTACTCACTGAGCCATCTCAGTGTCCACCAGACATGACTCG
GAATAGAGATAGACTTGGTATCAATAAGTTTAGTAGCAGCTCTGCCTGTA
ACATGACTTCTGTGAGGAATTATAGAATAATGACTACTGACAATTTAGAC
AGTTGGTCTATTGGAGTTTTTATAGCACAAAGACAGTCTCTCCAGATCTC
AGAGATTTCCACAAATCCTCTGAGGTATAGGAAATGCCTTACAACACATG
TTATTGTCTGTAAGACAAAGCTCCAACCTTTACTAAAATGGTACACAAAG
CAATTCTTTAAGTTATAGAGAGCTCAGATAGAACATAGAGTAGAACTGTT
ATTTCATTTTCAGCAGGAAATGTAACTCGGTTGGGAGAGTGCTCCTTAGT
GTGCAAAAAGCCCGGAGTTCTTCCCCCAGCAACATGTAGTCTGAGCTTGG
CGGCACACATCTGTAATTTCAGCACTGGGATGCGAAGGCAGGAGGGTCAG
AAGTTCAAGGTTATACTTTTTTGACAN

GATGTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXGTCTGGGCAAGACCCTGTCTCAAA
AGAAAAGGGCTGGGGTGGGGGTGGGGATGGGGGTATAACTAACACTCACA
TATGGACCTATTGTATGTGTAACCTCGACTCATCTGACTGTACATATCGA
ATTTTTTGACGCCTATATAACTTTTACCTGAACCACACAACTAAACATGT
ACCATCTTGTGGTATCGATCTTCCTACTTTTTTCTGTCCATTTACCTACT
ATCCTACCACCCCTCATTTTCTACTTCTCCGGACTTCTTCGCCTATAATA
CCCAAAATTTATTTTTTTCCGCCCTTCCCCTATCATTTCCCTACTATCAC
GTATTTCCCATCCCACCCCCGTGGTCCCACATTCATTTCTTTCAACGTTT
CATTTTCCCCCTTTCTTTTTCCCCCCGTTTCCCTTACTATCTCGACCACT
TTTCCTTCCCGCCCTTTTTCCAATCTCTCCGCCCCACCTTATAATCCTGC
CCTCTTTTCCCTTTCCTTCAACATATAATTAACTTCATCTATATCAGCCT
TTCCCCGCCTTACCCACTCTTCTCCCCCCTTTTTCATATTTTTACCTCTC
TCCACCACCCTTTACCCCCATTTTTTATTCTTGTCCTGTTACTACAACCT
TTTACATAAACCCACTCTCAGCCTACTTTCCCTTCCTCCGTTTAATTTCT
CCCCCGCTTTCTC

Query= MSMg01no103_o19.b1 MSMg01no103_o19.b1 CHROMAT_FILE:
MSMg01no103_o19.b1 PHD_FILE: MSMg01no103_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:59 2005
         (593 letters)



>mm_chr5_133089851_133090843
          Length = 993

 Score = 1033 bits (534), Expect = 0.0
 Identities = 580/596 (97%), Gaps = 6/596 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagagaaaccctgtctcaaaaaagcaaacaaacaaaaaccagaatgcaca-acttgca-a 58
           |||||||||||||||||||||||||||||||||||||||||||||||||| |  || | |
Sbjct: 952 aagagaaaccctgtctcaaaaaagcaaacaaacaaaaaccagaatgcacata--tggaga 895

                                                                       
Query: 59  g-taatgaacaacttgcagtaatcagttctttccttccacagtgtgggtcccaacggtta 117
           |  || | |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 894 gccaaag-acaacttgcagtaatcagttctttccttccacagtgtgggtcccaatggtta 836

                                                                       
Query: 118 ccgggcttggcagcaagtgcttttactcactgagccatctcagtgtccaccagacatgac 177
           ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 835 ccgggcttgacagcaagtgcttttactcactgagccatctctgtgtccaccagacatgac 776

                                                                       
Query: 178 tcggaatagagatagacttggtatcaataagtttagtagcagctctgcctgtaacatgac 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tcggaatagagatagacttggtatcaataagtttagtagcagctctgcctgtaacatgac 716

                                                                       
Query: 238 ttctgtgaggaattatagaataatgactactgacaatttagacagttggtctattggagt 297
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ttctgtgaggaattatagaacaatgactactgacaatttagacagttggtctattggagt 656

                                                                       
Query: 298 ttttatagcacaaagacagtctctccagatctcagagatttccacaaatcctctgaggta 357
           |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttttatagtacaaagacagcctctccagatctcagagatttccacaaatcctctgaggta 596

                                                                       
Query: 358 taggaaatgccttacaacacatgttattgtctgtaagacaaagctccaacctttactaaa 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 taggaaatgccttacaacacatgttattgtctgtaagacaaagctccaacctttactaaa 536

                                                                       
Query: 418 atggtacacaaagcaattctttaagttatagagagctcagatagaacatagagtagaact 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 535 atggtacacaaagcaattctttaagttatagagagctcagatagaacatagtgtagaact 476

                                                                       
Query: 478 gttatttcattttcagcaggaaatgtaactcggttgggagagtgctccttagtgtgcaaa 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gttatttcattttcagcaggaaatgtaactcggttgggagagtgctccttagtgtgcaaa 416

                                                                   
Query: 538 aagcccggagttcttcccccagcaacatgtagtctgagcttggcggcacacatctg 593
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aagcccggagttcttcccccagcaacatgtagtctgagcttggcggcacacatctg 360


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)