ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGG
AATTCATTCTATATCCTTGATAAATGCAACTATCCAAATCGACACACAAA
AAATGATTGTATGTTTTTTTCCAAAATCACCATGGATGGTAGATAATAGG
TGAAATACTTGATGCTTGTCCTAAAACATGAGGACGTTTTCTCTTCTTTT
AGTCTTCTAGTCATTTGTGATGCCGTTTCTGCCAGTTGATTGTAACCTTG
ATAGTGGCTTAGCAAACATATCCTCAAGTTTGTCTTCATTTGTGCTATCC
TTGAAATATACAGGATTCATACACTGTCAGTTTTACCTCTGTCTCTTCAA
AATACATAAAGCTGGTAGAGTCTCAGGTATCTGTGAAGCTAGCGATGCCT
GTCATTCTTCTTACTCACAAGACAGTGATATTGCTCAAGGGAGGTGTTGA
CACTGCTGCTCGGGAGTTTTATCTCTCTGGAAGGAAGTGGCTCCCAGACA
AGAGTTATGTTGGATCCCACTTGCTTGTCAGCCTCGTCACATGCTATCCC
TTGGCTGTATATTCTGTGATTATGTTTTCGTAATTTTCTGCTGATTGTAT
TAGAGAGTCTTTCTCCACGGTGGCAGCGTCTGTTTCCCATTAATTTTAAC
CATGGATCTGAATTTCAGAACAGGTCCTGAAGATTTGTAGATGTTTCA

NCTATATTTTTNTAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGGACAGGTAA
GCAGGAGTGCATAGGTTGGTGAGCAAAGATGGAGGCATGGGATAGTGGGA
TTCTGGAAGTGAAACCATGAAAGGGGATAACATTTGAAATGTAAATAATG
AACATTTCTAATAAAAACAAGGATTATCTATATTTCAGAAAAAAAGAAAA
AGAAAAAGAACTGACTCTACAAAGTTGTTCTCTGGCTGCAGCATACATTC
TGTGATACTCATACACTGGCATACATGTAAGCAACTGTGTATAAACACAC
ATAAAATAATAATAAAAATTAAATTGAATACAACTATTGAAATATATAGA
GAGACTTTTCTCACAAAAATATTGACAAACTCCTTGTTTTCAATTCACTT
TTATTCAATGTCAATGTAAGATTGTTTTCTATTGTATTACCACACAAGTT
CTCCTTGTCAAGAAAAGATGATGAGACTGAAAACAATTTAATGTACGGAG
CTGAAATATCCAGTTAGGCACATGGAGCTTATTCAAATGTGGTAATCAAC
ACTTAAGAAAGAGAAGCAGACTAGGCCGTAGGTCGCCTTTGAATGCAATA
AGAACTCGGTCATGATATTAAGCATTTGCAACTAAATACCCTTCCATGAA
CTTGGCTCCAAAGACC

Query= MSMg01no105_f08.b1 MSMg01no105_f08.b1 CHROMAT_FILE:
MSMg01no105_f08.b1 PHD_FILE: MSMg01no105_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:56 2005
         (630 letters)



>mm_chr5_59633291_59634321
          Length = 1031

 Score = 1160 bits (600), Expect = 0.0
 Identities = 621/628 (98%), Gaps = 1/628 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcattctatatccttgataaatgcaactatccaaatcgacacacaaaaaatgatt 63
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattctaaatccttgataaatgcaactatccaaatcgacacacaaaaaatgatt 263

                                                                       
Query: 64  gtatgttttttt-ccaaaatcaccatggatggtagataataggtgaaatacttgatgctt 122
           |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtattttttttttccaaaatcaccatggatggtagataataggtgaaatacttgatgctt 323

                                                                       
Query: 123 gtcctaaaacatgaggacgttttctcttcttttagtcttctagtcatttgtgatgccgtt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtcctaaaacatgaggacgttttctcttcttttagtcttctagtcatttgtgatgccgtt 383

                                                                       
Query: 183 tctgccagttgattgtaaccttgatagtggcttagcaaacatatcctcaagtttgtcttc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctgccagttgattgtaaccttgatagtggcttagcaaacatatcctcaagtttgtcttc 443

                                                                       
Query: 243 atttgtgctatccttgaaatatacaggattcatacactgtcagttttacctctgtctctt 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atttgtgctatccttgaaatatacaggattcatacactgtcagttttacctctgtctctt 503

                                                                       
Query: 303 caaaatacataaagctggtagagtctcaggtatctgtgaagctagcgatgcctgtcattc 362
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 504 caaaatacataaagctggtagagtctcaggtatctgtgaagccagcgatgcctgtcattc 563

                                                                       
Query: 363 ttcttactcacaagacagtgatattgctcaagggaggtgttgacactgctgctcgggagt 422
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 564 ttcttactcacaagacagtgatattgctcaagggaggtgttgacactgctgctccggagt 623

                                                                       
Query: 423 tttatctctctggaaggaagtggctcccagacaagagttatgttggatcccacttgcttg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttatctctctggaaggaagtggctcccagacaagagttatgttggatcccacttgcttg 683

                                                                       
Query: 483 tcagcctcgtcacatgctatcccttggctgtatattctgtgattatgttttcgtaatttt 542
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 684 tcagcctcgtcacatgctatccctcggctgtatattctgtgattatgttttcgtaatttt 743

                                                                       
Query: 543 ctgctgattgtattagagagtctttctccacggtggcagcgtctgtttcccattaatttt 602
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 744 ctgctgattgtattagagagtctttctccacggtgacagcgtctgtttcccattaatttt 803

                                       
Query: 603 aaccatggatctgaatttcagaacaggt 630
           ||||||||||||||||||||||||||||
Sbjct: 804 aaccatggatctgaatttcagaacaggt 831


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1031
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1021
Effective search space:   633020
Effective search space used:   633020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)